Gene : Medtr0002s0630 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF00329//PF01058 - Respiratory-chain NADH dehydrogenase, 30 Kd subunit (Complex1_30kDa) // NADH ubiquinone oxidoreductase, 20 Kd subunit (Oxidored_q6) Description:  NADH-quinone oxidoreductase protein
Genomic Order:  36 Name:  ? Medtr0002s0630
Secondary Identifier:  ? PAC:31084773
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-3781 Medicago truncatula pathologic  
Mtruncatula PWY-4302 Medicago truncatula pathologic  
Mtruncatula PWY-5083 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0002s0630 0.5kb upstream 0.5kb upstream 1760   true scaffold0002: 248456-250215 Medicago truncatula
Medtr0002s0630 0.5kb upstream 0.5kb upstream 500   false scaffold0002: 249716-250215 Medicago truncatula
Medtr0002s0630 0.5kb downstream 0.5kb downstream 1760   true scaffold0002: 247956-249715 Medicago truncatula
Medtr0002s0630 0.5kb downstream 0.5kb downstream 500   false scaffold0002: 247956-248455 Medicago truncatula
Medtr0002s0630 1.0kb upstream 1.0kb upstream 2260   true scaffold0002: 248456-250715 Medicago truncatula
Medtr0002s0630 1.0kb upstream 1.0kb upstream 1000   false scaffold0002: 249716-250715 Medicago truncatula
Medtr0002s0630 1.0kb downstream 1.0kb downstream 2260   true scaffold0002: 247456-249715 Medicago truncatula
Medtr0002s0630 1.0kb downstream 1.0kb downstream 1000   false scaffold0002: 247456-248455 Medicago truncatula
Medtr0002s0630 2.0kb upstream 2.0kb upstream 3260   true scaffold0002: 248456-251715 Medicago truncatula
Medtr0002s0630 2.0kb upstream 2.0kb upstream 2000   false scaffold0002: 249716-251715 Medicago truncatula
Medtr0002s0630 2.0kb downstream 2.0kb downstream 3260   true scaffold0002: 246456-249715 Medicago truncatula
Medtr0002s0630 2.0kb downstream 2.0kb downstream 2000   false scaffold0002: 246456-248455 Medicago truncatula
Medtr0002s0630 5.0kb upstream 5.0kb upstream 6260   true scaffold0002: 248456-254715 Medicago truncatula
Medtr0002s0630 5.0kb upstream 5.0kb upstream 5000   false scaffold0002: 249716-254715 Medicago truncatula
Medtr0002s0630 5.0kb downstream 5.0kb downstream 6260   true scaffold0002: 243456-249715 Medicago truncatula
Medtr0002s0630 5.0kb downstream 5.0kb downstream 5000   false scaffold0002: 243456-248455 Medicago truncatula
Medtr0002s0630 10.0kb upstream 10.0kb upstream 11260   true scaffold0002: 248456-259715 Medicago truncatula
Medtr0002s0630 10.0kb upstream 10.0kb upstream 10000   false scaffold0002: 249716-259715 Medicago truncatula
Medtr0002s0630 10.0kb downstream 10.0kb downstream 11260   true scaffold0002: 238456-249715 Medicago truncatula
Medtr0002s0630 10.0kb downstream 10.0kb downstream 10000   false scaffold0002: 238456-248455 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122270088 5265 Fabidae Singleton cluster - no MSA
124038156 5270 Rosid View MSA
123753609 5271 Pentapetalae View MSA
122797515 5272 Eudicot View MSA
122050391 5273 Angiosperm View MSA
121349421 5274 Embryophyte View MSA
123381301 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain