Gene : Medtr0002s0530 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF00119//PF00318 - ATP synthase A chain (ATP-synt_A) // Ribosomal protein S2 (Ribosomal_S2) Description:  ATP synthase F0, A subunit
Genomic Order:  31 Name:  ? Medtr0002s0530
Secondary Identifier:  ? PAC:31084760
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0002s0530 0.5kb upstream 0.5kb upstream 2219   true scaffold0002: 229567-231785 Medicago truncatula
Medtr0002s0530 0.5kb upstream 0.5kb upstream 500   false scaffold0002: 229567-230066 Medicago truncatula
Medtr0002s0530 0.5kb downstream 0.5kb downstream 2219   true scaffold0002: 230067-232285 Medicago truncatula
Medtr0002s0530 0.5kb downstream 0.5kb downstream 500   false scaffold0002: 231786-232285 Medicago truncatula
Medtr0002s0530 1.0kb upstream 1.0kb upstream 2719   true scaffold0002: 229067-231785 Medicago truncatula
Medtr0002s0530 1.0kb upstream 1.0kb upstream 1000   false scaffold0002: 229067-230066 Medicago truncatula
Medtr0002s0530 1.0kb downstream 1.0kb downstream 2719   true scaffold0002: 230067-232785 Medicago truncatula
Medtr0002s0530 1.0kb downstream 1.0kb downstream 1000   false scaffold0002: 231786-232785 Medicago truncatula
Medtr0002s0530 2.0kb upstream 2.0kb upstream 3719   true scaffold0002: 228067-231785 Medicago truncatula
Medtr0002s0530 2.0kb upstream 2.0kb upstream 2000   false scaffold0002: 228067-230066 Medicago truncatula
Medtr0002s0530 2.0kb downstream 2.0kb downstream 3719   true scaffold0002: 230067-233785 Medicago truncatula
Medtr0002s0530 2.0kb downstream 2.0kb downstream 2000   false scaffold0002: 231786-233785 Medicago truncatula
Medtr0002s0530 5.0kb upstream 5.0kb upstream 6719   true scaffold0002: 225067-231785 Medicago truncatula
Medtr0002s0530 5.0kb upstream 5.0kb upstream 5000   false scaffold0002: 225067-230066 Medicago truncatula
Medtr0002s0530 5.0kb downstream 5.0kb downstream 6719   true scaffold0002: 230067-236785 Medicago truncatula
Medtr0002s0530 5.0kb downstream 5.0kb downstream 5000   false scaffold0002: 231786-236785 Medicago truncatula
Medtr0002s0530 10.0kb upstream 10.0kb upstream 11719   true scaffold0002: 220067-231785 Medicago truncatula
Medtr0002s0530 10.0kb upstream 10.0kb upstream 10000   false scaffold0002: 220067-230066 Medicago truncatula
Medtr0002s0530 10.0kb downstream 10.0kb downstream 11719   true scaffold0002: 230067-241785 Medicago truncatula
Medtr0002s0530 10.0kb downstream 10.0kb downstream 10000   false scaffold0002: 231786-241785 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029216 5273 Angiosperm View MSA
122270079 5265 Fabidae Singleton cluster - no MSA
124040361 5270 Rosid View MSA
123752003 5271 Pentapetalae View MSA
122795153 5272 Eudicot View MSA
121348660 5274 Embryophyte View MSA
123428637 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain