Gene : Medtr0001s0660 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11695//PTHR11695:SF568 - ALCOHOL DEHYDROGENASE RELATED Description:  zinc-binding alcohol dehydrogenase family protein
Genomic Order:  19 Name:  ? Medtr0001s0660
Secondary Identifier:  ? PAC:31084631
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6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5486 Medicago truncatula pathologic  
Mtruncatula PWY-6313 Medicago truncatula pathologic  
Mtruncatula PWY-6333 Medicago truncatula pathologic  
Mtruncatula PWY66-21 Medicago truncatula pathologic  
Mtruncatula PWY66-389 Medicago truncatula pathologic  
Mtruncatula PWY-6802 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0001s0660 0.5kb upstream 0.5kb upstream 5396   true scaffold0001: 502647-508042 Medicago truncatula
Medtr0001s0660 0.5kb upstream 0.5kb upstream 500   false scaffold0001: 507543-508042 Medicago truncatula
Medtr0001s0660 0.5kb downstream 0.5kb downstream 5396   true scaffold0001: 502147-507542 Medicago truncatula
Medtr0001s0660 0.5kb downstream 0.5kb downstream 500   false scaffold0001: 502147-502646 Medicago truncatula
Medtr0001s0660 1.0kb upstream 1.0kb upstream 5896   true scaffold0001: 502647-508542 Medicago truncatula
Medtr0001s0660 1.0kb upstream 1.0kb upstream 1000   false scaffold0001: 507543-508542 Medicago truncatula
Medtr0001s0660 1.0kb downstream 1.0kb downstream 5896   true scaffold0001: 501647-507542 Medicago truncatula
Medtr0001s0660 1.0kb downstream 1.0kb downstream 1000   false scaffold0001: 501647-502646 Medicago truncatula
Medtr0001s0660 2.0kb upstream 2.0kb upstream 6896   true scaffold0001: 502647-509542 Medicago truncatula
Medtr0001s0660 2.0kb upstream 2.0kb upstream 2000   false scaffold0001: 507543-509542 Medicago truncatula
Medtr0001s0660 2.0kb downstream 2.0kb downstream 6896   true scaffold0001: 500647-507542 Medicago truncatula
Medtr0001s0660 2.0kb downstream 2.0kb downstream 2000   false scaffold0001: 500647-502646 Medicago truncatula
Medtr0001s0660 5.0kb upstream 5.0kb upstream 9896   true scaffold0001: 502647-512542 Medicago truncatula
Medtr0001s0660 5.0kb upstream 5.0kb upstream 5000   false scaffold0001: 507543-512542 Medicago truncatula
Medtr0001s0660 5.0kb downstream 5.0kb downstream 9896   true scaffold0001: 497647-507542 Medicago truncatula
Medtr0001s0660 5.0kb downstream 5.0kb downstream 5000   false scaffold0001: 497647-502646 Medicago truncatula
Medtr0001s0660 10.0kb upstream 10.0kb upstream 14896   true scaffold0001: 502647-517542 Medicago truncatula
Medtr0001s0660 10.0kb upstream 10.0kb upstream 10000   false scaffold0001: 507543-517542 Medicago truncatula
Medtr0001s0660 10.0kb downstream 10.0kb downstream 14896   true scaffold0001: 492647-507542 Medicago truncatula
Medtr0001s0660 10.0kb downstream 10.0kb downstream 10000   false scaffold0001: 492647-502646 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313135 5265 Fabidae View MSA
124072751 5270 Rosid View MSA
123744522 5271 Pentapetalae View MSA
122796931 5272 Eudicot View MSA
122046886 5273 Angiosperm View MSA
121310668 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.558        
cufflinks 7.668        
cufflinks 15.854     High  
cufflinks 1.028       Low
cufflinks 10.672     High  
cufflinks 4.748        
cufflinks 2.932        
cufflinks 14.762     High  
cufflinks 0.356       Low

0 Strain