Gene : Medtr0004s0490 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR21443 - CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 Description:  oligomeric component-related/COG complex component
Genomic Order:  16 Name:  ? Medtr0004s0490
Secondary Identifier:  ? PAC:31076753
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0004s0490 0.5kb upstream 0.5kb upstream 6945   true scaffold0004: 233585-240529 Medicago truncatula
Medtr0004s0490 0.5kb upstream 0.5kb upstream 500   false scaffold0004: 240030-240529 Medicago truncatula
Medtr0004s0490 0.5kb downstream 0.5kb downstream 6945   true scaffold0004: 233085-240029 Medicago truncatula
Medtr0004s0490 0.5kb downstream 0.5kb downstream 500   false scaffold0004: 233085-233584 Medicago truncatula
Medtr0004s0490 1.0kb upstream 1.0kb upstream 7445   true scaffold0004: 233585-241029 Medicago truncatula
Medtr0004s0490 1.0kb upstream 1.0kb upstream 1000   false scaffold0004: 240030-241029 Medicago truncatula
Medtr0004s0490 1.0kb downstream 1.0kb downstream 7445   true scaffold0004: 232585-240029 Medicago truncatula
Medtr0004s0490 1.0kb downstream 1.0kb downstream 1000   false scaffold0004: 232585-233584 Medicago truncatula
Medtr0004s0490 2.0kb upstream 2.0kb upstream 8445   true scaffold0004: 233585-242029 Medicago truncatula
Medtr0004s0490 2.0kb upstream 2.0kb upstream 2000   false scaffold0004: 240030-242029 Medicago truncatula
Medtr0004s0490 2.0kb downstream 2.0kb downstream 8445   true scaffold0004: 231585-240029 Medicago truncatula
Medtr0004s0490 2.0kb downstream 2.0kb downstream 2000   false scaffold0004: 231585-233584 Medicago truncatula
Medtr0004s0490 5.0kb upstream 5.0kb upstream 11445   true scaffold0004: 233585-245029 Medicago truncatula
Medtr0004s0490 5.0kb upstream 5.0kb upstream 5000   false scaffold0004: 240030-245029 Medicago truncatula
Medtr0004s0490 5.0kb downstream 5.0kb downstream 11445   true scaffold0004: 228585-240029 Medicago truncatula
Medtr0004s0490 5.0kb downstream 5.0kb downstream 5000   false scaffold0004: 228585-233584 Medicago truncatula
Medtr0004s0490 10.0kb upstream 10.0kb upstream 16445   true scaffold0004: 233585-250029 Medicago truncatula
Medtr0004s0490 10.0kb upstream 10.0kb upstream 10000   false scaffold0004: 240030-250029 Medicago truncatula
Medtr0004s0490 10.0kb downstream 10.0kb downstream 16445   true scaffold0004: 223585-240029 Medicago truncatula
Medtr0004s0490 10.0kb downstream 10.0kb downstream 10000   false scaffold0004: 223585-233584 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299943 5265 Fabidae View MSA
124066067 5270 Rosid View MSA
123738545 5271 Pentapetalae View MSA
122791733 5272 Eudicot View MSA
122041603 5273 Angiosperm View MSA
121347669 5274 Embryophyte View MSA
123424690 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.616        
cufflinks 7.671        
cufflinks 6.893        
cufflinks 2.624        
cufflinks 9.634       High
cufflinks 1.243       Low
cufflinks 4.907        
cufflinks 6.571        
cufflinks 6.707        

0 Strain