Gene : Medtr0004s0230 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  5
Name:  ? Medtr0004s0230 Secondary Identifier:  ? PAC:31076747
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0004s0230 0.5kb upstream 0.5kb upstream 2806   true scaffold0004: 91319-94124 Medicago truncatula
Medtr0004s0230 0.5kb upstream 0.5kb upstream 500   false scaffold0004: 91319-91818 Medicago truncatula
Medtr0004s0230 0.5kb downstream 0.5kb downstream 2806   true scaffold0004: 91819-94624 Medicago truncatula
Medtr0004s0230 0.5kb downstream 0.5kb downstream 500   false scaffold0004: 94125-94624 Medicago truncatula
Medtr0004s0230 1.0kb upstream 1.0kb upstream 3306   true scaffold0004: 90819-94124 Medicago truncatula
Medtr0004s0230 1.0kb upstream 1.0kb upstream 1000   false scaffold0004: 90819-91818 Medicago truncatula
Medtr0004s0230 1.0kb downstream 1.0kb downstream 3306   true scaffold0004: 91819-95124 Medicago truncatula
Medtr0004s0230 1.0kb downstream 1.0kb downstream 1000   false scaffold0004: 94125-95124 Medicago truncatula
Medtr0004s0230 2.0kb upstream 2.0kb upstream 4306   true scaffold0004: 89819-94124 Medicago truncatula
Medtr0004s0230 2.0kb upstream 2.0kb upstream 2000   false scaffold0004: 89819-91818 Medicago truncatula
Medtr0004s0230 2.0kb downstream 2.0kb downstream 4306   true scaffold0004: 91819-96124 Medicago truncatula
Medtr0004s0230 2.0kb downstream 2.0kb downstream 2000   false scaffold0004: 94125-96124 Medicago truncatula
Medtr0004s0230 5.0kb upstream 5.0kb upstream 7306   true scaffold0004: 86819-94124 Medicago truncatula
Medtr0004s0230 5.0kb upstream 5.0kb upstream 5000   false scaffold0004: 86819-91818 Medicago truncatula
Medtr0004s0230 5.0kb downstream 5.0kb downstream 7306   true scaffold0004: 91819-99124 Medicago truncatula
Medtr0004s0230 5.0kb downstream 5.0kb downstream 5000   false scaffold0004: 94125-99124 Medicago truncatula
Medtr0004s0230 10.0kb upstream 10.0kb upstream 12306   true scaffold0004: 81819-94124 Medicago truncatula
Medtr0004s0230 10.0kb upstream 10.0kb upstream 10000   false scaffold0004: 81819-91818 Medicago truncatula
Medtr0004s0230 10.0kb downstream 10.0kb downstream 12306   true scaffold0004: 91819-104124 Medicago truncatula
Medtr0004s0230 10.0kb downstream 10.0kb downstream 10000   false scaffold0004: 94125-104124 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308030 5265 Fabidae View MSA
124060418 5270 Rosid View MSA
123736599 5271 Pentapetalae View MSA
122792685 5272 Eudicot View MSA
122045033 5273 Angiosperm View MSA
121310389 5274 Embryophyte View MSA
123347885 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.301       Low
cufflinks 2.775        
cufflinks 3.042        
cufflinks 2.916        
cufflinks 4.418       High
cufflinks 0.923       Low
cufflinks 1.439        
cufflinks 2.867        
cufflinks 2.597        

0 Strain