Gene : Medtr0009s0120 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR15245:SF11 - PHOSPHATIDYLINOSITOL 3-KINASE-RELATED PROTEIN KINASE Description:  phosphatidylinositol 3- and 4-kinase
Genomic Order:  6 Name:  ? Medtr0009s0120
Secondary Identifier:  ? PAC:31106152
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6351 Medicago truncatula pathologic  
Mtruncatula PWY-6352 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0009s0120 0.5kb upstream 0.5kb upstream 3665   true scaffold0009: 58996-62660 Medicago truncatula
Medtr0009s0120 0.5kb upstream 0.5kb upstream 500   false scaffold0009: 62161-62660 Medicago truncatula
Medtr0009s0120 0.5kb downstream 0.5kb downstream 3665   true scaffold0009: 58496-62160 Medicago truncatula
Medtr0009s0120 0.5kb downstream 0.5kb downstream 500   false scaffold0009: 58496-58995 Medicago truncatula
Medtr0009s0120 1.0kb upstream 1.0kb upstream 4165   true scaffold0009: 58996-63160 Medicago truncatula
Medtr0009s0120 1.0kb upstream 1.0kb upstream 1000   false scaffold0009: 62161-63160 Medicago truncatula
Medtr0009s0120 1.0kb downstream 1.0kb downstream 4165   true scaffold0009: 57996-62160 Medicago truncatula
Medtr0009s0120 1.0kb downstream 1.0kb downstream 1000   false scaffold0009: 57996-58995 Medicago truncatula
Medtr0009s0120 2.0kb upstream 2.0kb upstream 5165   true scaffold0009: 58996-64160 Medicago truncatula
Medtr0009s0120 2.0kb upstream 2.0kb upstream 2000   false scaffold0009: 62161-64160 Medicago truncatula
Medtr0009s0120 2.0kb downstream 2.0kb downstream 5165   true scaffold0009: 56996-62160 Medicago truncatula
Medtr0009s0120 2.0kb downstream 2.0kb downstream 2000   false scaffold0009: 56996-58995 Medicago truncatula
Medtr0009s0120 5.0kb upstream 5.0kb upstream 8165   true scaffold0009: 58996-67160 Medicago truncatula
Medtr0009s0120 5.0kb upstream 5.0kb upstream 5000   false scaffold0009: 62161-67160 Medicago truncatula
Medtr0009s0120 5.0kb downstream 5.0kb downstream 8165   true scaffold0009: 53996-62160 Medicago truncatula
Medtr0009s0120 5.0kb downstream 5.0kb downstream 5000   false scaffold0009: 53996-58995 Medicago truncatula
Medtr0009s0120 10.0kb upstream 10.0kb upstream 13165   true scaffold0009: 58996-72160 Medicago truncatula
Medtr0009s0120 10.0kb upstream 10.0kb upstream 10000   false scaffold0009: 62161-72160 Medicago truncatula
Medtr0009s0120 10.0kb downstream 10.0kb downstream 13165   true scaffold0009: 48996-62160 Medicago truncatula
Medtr0009s0120 10.0kb downstream 10.0kb downstream 10000   false scaffold0009: 48996-58995 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303945 5265 Fabidae View MSA
124068330 5270 Rosid View MSA
123741800 5271 Pentapetalae View MSA
122793394 5272 Eudicot View MSA
122050959 5273 Angiosperm View MSA
121351687 5274 Embryophyte View MSA
123427554 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 238.861     High  
cufflinks 77.704     High  
cufflinks 80.359     High  
cufflinks 239.135     High  
cufflinks 66.292     High  
cufflinks 38.081     High Low
cufflinks 223.797     High  
cufflinks 86.937     High  
cufflinks 254.522     High High

0 Strain