Gene : Medtr0009s0390 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11528:SF41 - HEAT SHOCK PROTEIN 89.1 Description:  heat shock protein 81-2
Genomic Order:  19 Name:  ? Medtr0009s0390
Secondary Identifier:  ? PAC:31106163
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0009s0390 0.5kb upstream 0.5kb upstream 7879   true scaffold0009: 205774-213652 Medicago truncatula
Medtr0009s0390 0.5kb upstream 0.5kb upstream 500   false scaffold0009: 205774-206273 Medicago truncatula
Medtr0009s0390 0.5kb downstream 0.5kb downstream 7879   true scaffold0009: 206274-214152 Medicago truncatula
Medtr0009s0390 0.5kb downstream 0.5kb downstream 500   false scaffold0009: 213653-214152 Medicago truncatula
Medtr0009s0390 1.0kb upstream 1.0kb upstream 8379   true scaffold0009: 205274-213652 Medicago truncatula
Medtr0009s0390 1.0kb upstream 1.0kb upstream 1000   false scaffold0009: 205274-206273 Medicago truncatula
Medtr0009s0390 1.0kb downstream 1.0kb downstream 8379   true scaffold0009: 206274-214652 Medicago truncatula
Medtr0009s0390 1.0kb downstream 1.0kb downstream 1000   false scaffold0009: 213653-214652 Medicago truncatula
Medtr0009s0390 2.0kb upstream 2.0kb upstream 9379   true scaffold0009: 204274-213652 Medicago truncatula
Medtr0009s0390 2.0kb upstream 2.0kb upstream 2000   false scaffold0009: 204274-206273 Medicago truncatula
Medtr0009s0390 2.0kb downstream 2.0kb downstream 9379   true scaffold0009: 206274-215652 Medicago truncatula
Medtr0009s0390 2.0kb downstream 2.0kb downstream 2000   false scaffold0009: 213653-215652 Medicago truncatula
Medtr0009s0390 5.0kb upstream 5.0kb upstream 12379   true scaffold0009: 201274-213652 Medicago truncatula
Medtr0009s0390 5.0kb upstream 5.0kb upstream 5000   false scaffold0009: 201274-206273 Medicago truncatula
Medtr0009s0390 5.0kb downstream 5.0kb downstream 12379   true scaffold0009: 206274-218652 Medicago truncatula
Medtr0009s0390 5.0kb downstream 5.0kb downstream 5000   false scaffold0009: 213653-218652 Medicago truncatula
Medtr0009s0390 10.0kb upstream 10.0kb upstream 17379   true scaffold0009: 196274-213652 Medicago truncatula
Medtr0009s0390 10.0kb upstream 10.0kb upstream 10000   false scaffold0009: 196274-206273 Medicago truncatula
Medtr0009s0390 10.0kb downstream 10.0kb downstream 17379   true scaffold0009: 206274-223652 Medicago truncatula
Medtr0009s0390 10.0kb downstream 10.0kb downstream 10000   false scaffold0009: 213653-223652 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299890 5265 Fabidae View MSA
124066977 5270 Rosid View MSA
123738951 5271 Pentapetalae View MSA
122790091 5272 Eudicot View MSA
122041747 5273 Angiosperm View MSA
121344941 5274 Embryophyte View MSA
123428204 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.241     High  
cufflinks 19.225     High  
cufflinks 18.598     High  
cufflinks 2.25       Low
cufflinks 36.656     High High
cufflinks 2.125       Low
cufflinks 6.447        
cufflinks 24.424     High  
cufflinks 5.357        

0 Strain