Gene : Medtr0011s0330 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23105//PTHR23105:SF57 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER Description:  ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
Genomic Order:  11 Name:  ? Medtr0011s0330
Secondary Identifier:  ? PAC:31101182
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0011s0330 0.5kb upstream 0.5kb upstream 3834   true scaffold0011: 244968-248801 Medicago truncatula
Medtr0011s0330 0.5kb upstream 0.5kb upstream 500   false scaffold0011: 248302-248801 Medicago truncatula
Medtr0011s0330 0.5kb downstream 0.5kb downstream 3834   true scaffold0011: 244468-248301 Medicago truncatula
Medtr0011s0330 0.5kb downstream 0.5kb downstream 500   false scaffold0011: 244468-244967 Medicago truncatula
Medtr0011s0330 1.0kb upstream 1.0kb upstream 4334   true scaffold0011: 244968-249301 Medicago truncatula
Medtr0011s0330 1.0kb upstream 1.0kb upstream 1000   false scaffold0011: 248302-249301 Medicago truncatula
Medtr0011s0330 1.0kb downstream 1.0kb downstream 4334   true scaffold0011: 243968-248301 Medicago truncatula
Medtr0011s0330 1.0kb downstream 1.0kb downstream 1000   false scaffold0011: 243968-244967 Medicago truncatula
Medtr0011s0330 2.0kb upstream 2.0kb upstream 5334   true scaffold0011: 244968-250301 Medicago truncatula
Medtr0011s0330 2.0kb upstream 2.0kb upstream 2000   false scaffold0011: 248302-250301 Medicago truncatula
Medtr0011s0330 2.0kb downstream 2.0kb downstream 5334   true scaffold0011: 242968-248301 Medicago truncatula
Medtr0011s0330 2.0kb downstream 2.0kb downstream 2000   false scaffold0011: 242968-244967 Medicago truncatula
Medtr0011s0330 5.0kb upstream 5.0kb upstream 8334   true scaffold0011: 244968-253301 Medicago truncatula
Medtr0011s0330 5.0kb upstream 5.0kb upstream 5000   false scaffold0011: 248302-253301 Medicago truncatula
Medtr0011s0330 5.0kb downstream 5.0kb downstream 8334   true scaffold0011: 239968-248301 Medicago truncatula
Medtr0011s0330 5.0kb downstream 5.0kb downstream 5000   false scaffold0011: 239968-244967 Medicago truncatula
Medtr0011s0330 10.0kb upstream 10.0kb upstream 13334   true scaffold0011: 244968-258301 Medicago truncatula
Medtr0011s0330 10.0kb upstream 10.0kb upstream 10000   false scaffold0011: 248302-258301 Medicago truncatula
Medtr0011s0330 10.0kb downstream 10.0kb downstream 13334   true scaffold0011: 234968-248301 Medicago truncatula
Medtr0011s0330 10.0kb downstream 10.0kb downstream 10000   false scaffold0011: 234968-244967 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310582 5265 Fabidae View MSA
124071487 5270 Rosid View MSA
123745089 5271 Pentapetalae View MSA
122792689 5272 Eudicot View MSA
122048288 5273 Angiosperm View MSA
121348705 5274 Embryophyte View MSA
123423886 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.431       Low
cufflinks 3.589       Low
cufflinks 4.392        
cufflinks 7.381        
cufflinks 8.689       High
cufflinks 8.074        
cufflinks 3.91        
cufflinks 4.128        
cufflinks 9.001       High

0 Strain