Gene : Medtr0018s0310 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR13131:SF5 - CYSTINE TRANSPORTER Description:  lysosomal cystine transporter family protein
Genomic Order:  10 Name:  ? Medtr0018s0310
Secondary Identifier:  ? PAC:31105769
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0018s0310 0.5kb upstream 0.5kb upstream 4401   true scaffold0018: 182463-186863 Medicago truncatula
Medtr0018s0310 0.5kb upstream 0.5kb upstream 500   false scaffold0018: 182463-182962 Medicago truncatula
Medtr0018s0310 0.5kb downstream 0.5kb downstream 4401   true scaffold0018: 182963-187363 Medicago truncatula
Medtr0018s0310 0.5kb downstream 0.5kb downstream 500   false scaffold0018: 186864-187363 Medicago truncatula
Medtr0018s0310 1.0kb upstream 1.0kb upstream 4901   true scaffold0018: 181963-186863 Medicago truncatula
Medtr0018s0310 1.0kb upstream 1.0kb upstream 1000   false scaffold0018: 181963-182962 Medicago truncatula
Medtr0018s0310 1.0kb downstream 1.0kb downstream 4901   true scaffold0018: 182963-187863 Medicago truncatula
Medtr0018s0310 1.0kb downstream 1.0kb downstream 1000   false scaffold0018: 186864-187863 Medicago truncatula
Medtr0018s0310 2.0kb upstream 2.0kb upstream 5901   true scaffold0018: 180963-186863 Medicago truncatula
Medtr0018s0310 2.0kb upstream 2.0kb upstream 2000   false scaffold0018: 180963-182962 Medicago truncatula
Medtr0018s0310 2.0kb downstream 2.0kb downstream 5901   true scaffold0018: 182963-188863 Medicago truncatula
Medtr0018s0310 2.0kb downstream 2.0kb downstream 2000   false scaffold0018: 186864-188863 Medicago truncatula
Medtr0018s0310 5.0kb upstream 5.0kb upstream 8901   true scaffold0018: 177963-186863 Medicago truncatula
Medtr0018s0310 5.0kb upstream 5.0kb upstream 5000   false scaffold0018: 177963-182962 Medicago truncatula
Medtr0018s0310 5.0kb downstream 5.0kb downstream 8901   true scaffold0018: 182963-191863 Medicago truncatula
Medtr0018s0310 5.0kb downstream 5.0kb downstream 5000   false scaffold0018: 186864-191863 Medicago truncatula
Medtr0018s0310 10.0kb upstream 10.0kb upstream 13901   true scaffold0018: 172963-186863 Medicago truncatula
Medtr0018s0310 10.0kb upstream 10.0kb upstream 10000   false scaffold0018: 172963-182962 Medicago truncatula
Medtr0018s0310 10.0kb downstream 10.0kb downstream 13901   true scaffold0018: 182963-196863 Medicago truncatula
Medtr0018s0310 10.0kb downstream 10.0kb downstream 10000   false scaffold0018: 186864-196863 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310082 5265 Fabidae View MSA
124063559 5270 Rosid View MSA
123752283 5271 Pentapetalae View MSA
122786294 5272 Eudicot View MSA
122043856 5273 Angiosperm View MSA
121344453 5274 Embryophyte View MSA
123380048 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.129        
cufflinks 0.296        
cufflinks 0.86       High
cufflinks 0.078       Low
cufflinks 0.387        
cufflinks 0.313        
cufflinks 0.171        
cufflinks 0.463        
cufflinks 0.051     Low Low

0 Strain