Gene : Medtr0018s0090 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR22880:SF156 - TRANSCRIPTION FACTOR GTE10 Description:  global transcription factor group protein
Genomic Order:  2 Name:  ? Medtr0018s0090
Secondary Identifier:  ? PAC:31105778
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0018s0090 0.5kb upstream 0.5kb upstream 10910   true scaffold0018: 25446-36355 Medicago truncatula
Medtr0018s0090 0.5kb upstream 0.5kb upstream 500   false scaffold0018: 35856-36355 Medicago truncatula
Medtr0018s0090 0.5kb downstream 0.5kb downstream 10910   true scaffold0018: 24946-35855 Medicago truncatula
Medtr0018s0090 0.5kb downstream 0.5kb downstream 500   false scaffold0018: 24946-25445 Medicago truncatula
Medtr0018s0090 1.0kb upstream 1.0kb upstream 11410   true scaffold0018: 25446-36855 Medicago truncatula
Medtr0018s0090 1.0kb upstream 1.0kb upstream 1000   false scaffold0018: 35856-36855 Medicago truncatula
Medtr0018s0090 1.0kb downstream 1.0kb downstream 11410   true scaffold0018: 24446-35855 Medicago truncatula
Medtr0018s0090 1.0kb downstream 1.0kb downstream 1000   false scaffold0018: 24446-25445 Medicago truncatula
Medtr0018s0090 2.0kb upstream 2.0kb upstream 12410   true scaffold0018: 25446-37855 Medicago truncatula
Medtr0018s0090 2.0kb upstream 2.0kb upstream 2000   false scaffold0018: 35856-37855 Medicago truncatula
Medtr0018s0090 2.0kb downstream 2.0kb downstream 12410   true scaffold0018: 23446-35855 Medicago truncatula
Medtr0018s0090 2.0kb downstream 2.0kb downstream 2000   false scaffold0018: 23446-25445 Medicago truncatula
Medtr0018s0090 5.0kb upstream 5.0kb upstream 15410   true scaffold0018: 25446-40855 Medicago truncatula
Medtr0018s0090 5.0kb upstream 5.0kb upstream 5000   false scaffold0018: 35856-40855 Medicago truncatula
Medtr0018s0090 5.0kb downstream 5.0kb downstream 15410   true scaffold0018: 20446-35855 Medicago truncatula
Medtr0018s0090 5.0kb downstream 5.0kb downstream 5000   false scaffold0018: 20446-25445 Medicago truncatula
Medtr0018s0090 10.0kb upstream 10.0kb upstream 20410   true scaffold0018: 25446-45855 Medicago truncatula
Medtr0018s0090 10.0kb upstream 10.0kb upstream 10000   false scaffold0018: 35856-45855 Medicago truncatula
Medtr0018s0090 10.0kb downstream 10.0kb downstream 20410   true scaffold0018: 15446-35855 Medicago truncatula
Medtr0018s0090 10.0kb downstream 10.0kb downstream 10000   false scaffold0018: 15446-25445 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299827 5265 Fabidae View MSA
124067873 5270 Rosid View MSA
123742171 5271 Pentapetalae View MSA
122795525 5272 Eudicot View MSA
122044532 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121347470 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.505        
cufflinks 1.423        
cufflinks 2.225       High
cufflinks 0.432       Low
cufflinks 2.386       High
cufflinks 0.445       Low
cufflinks 0.946        
cufflinks 1.938        
cufflinks 0.712        

0 Strain