Gene : Medtr0016s0050 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR33265:SF8 - F5F19.20 PROTEIN Description:  Avr9/Cf-9 rapidly elicited protein
Genomic Order:  5 Name:  ? Medtr0016s0050
Secondary Identifier:  ? PAC:31105933
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0016s0050 0.5kb upstream 0.5kb upstream 989   true scaffold0016: 86156-87144 Medicago truncatula
Medtr0016s0050 0.5kb upstream 0.5kb upstream 500   false scaffold0016: 86156-86655 Medicago truncatula
Medtr0016s0050 0.5kb downstream 0.5kb downstream 989   true scaffold0016: 86656-87644 Medicago truncatula
Medtr0016s0050 0.5kb downstream 0.5kb downstream 500   false scaffold0016: 87145-87644 Medicago truncatula
Medtr0016s0050 1.0kb upstream 1.0kb upstream 1489   true scaffold0016: 85656-87144 Medicago truncatula
Medtr0016s0050 1.0kb upstream 1.0kb upstream 1000   false scaffold0016: 85656-86655 Medicago truncatula
Medtr0016s0050 1.0kb downstream 1.0kb downstream 1489   true scaffold0016: 86656-88144 Medicago truncatula
Medtr0016s0050 1.0kb downstream 1.0kb downstream 1000   false scaffold0016: 87145-88144 Medicago truncatula
Medtr0016s0050 2.0kb upstream 2.0kb upstream 2489   true scaffold0016: 84656-87144 Medicago truncatula
Medtr0016s0050 2.0kb upstream 2.0kb upstream 2000   false scaffold0016: 84656-86655 Medicago truncatula
Medtr0016s0050 2.0kb downstream 2.0kb downstream 2489   true scaffold0016: 86656-89144 Medicago truncatula
Medtr0016s0050 2.0kb downstream 2.0kb downstream 2000   false scaffold0016: 87145-89144 Medicago truncatula
Medtr0016s0050 5.0kb upstream 5.0kb upstream 5489   true scaffold0016: 81656-87144 Medicago truncatula
Medtr0016s0050 5.0kb upstream 5.0kb upstream 5000   false scaffold0016: 81656-86655 Medicago truncatula
Medtr0016s0050 5.0kb downstream 5.0kb downstream 5489   true scaffold0016: 86656-92144 Medicago truncatula
Medtr0016s0050 5.0kb downstream 5.0kb downstream 5000   false scaffold0016: 87145-92144 Medicago truncatula
Medtr0016s0050 10.0kb upstream 10.0kb upstream 10489   true scaffold0016: 76656-87144 Medicago truncatula
Medtr0016s0050 10.0kb upstream 10.0kb upstream 10000   false scaffold0016: 76656-86655 Medicago truncatula
Medtr0016s0050 10.0kb downstream 10.0kb downstream 10489   true scaffold0016: 86656-97144 Medicago truncatula
Medtr0016s0050 10.0kb downstream 10.0kb downstream 10000   false scaffold0016: 87145-97144 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313783 5265 Fabidae View MSA
124070746 5270 Rosid View MSA
123749628 5271 Pentapetalae View MSA
122795982 5272 Eudicot View MSA
122049050 5273 Angiosperm View MSA
121311224 5274 Embryophyte View MSA
123348548 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain