Gene : Medtr0024s0080 M. truncatula Mt4.0v1
Defline:  (1 of 94) PF03140 - Plant protein of unknown function (DUF247) Description:  DUF247 domain protein
Genomic Order:  7 Name:  ? Medtr0024s0080
Secondary Identifier:  ? PAC:31061888
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0024s0080 0.5kb upstream 0.5kb upstream 1739   true scaffold0024: 34619-36357 Medicago truncatula
Medtr0024s0080 0.5kb upstream 0.5kb upstream 500   false scaffold0024: 35858-36357 Medicago truncatula
Medtr0024s0080 0.5kb downstream 0.5kb downstream 1739   true scaffold0024: 34119-35857 Medicago truncatula
Medtr0024s0080 0.5kb downstream 0.5kb downstream 500   false scaffold0024: 34119-34618 Medicago truncatula
Medtr0024s0080 1.0kb upstream 1.0kb upstream 2239   true scaffold0024: 34619-36857 Medicago truncatula
Medtr0024s0080 1.0kb upstream 1.0kb upstream 1000   false scaffold0024: 35858-36857 Medicago truncatula
Medtr0024s0080 1.0kb downstream 1.0kb downstream 2239   true scaffold0024: 33619-35857 Medicago truncatula
Medtr0024s0080 1.0kb downstream 1.0kb downstream 1000   false scaffold0024: 33619-34618 Medicago truncatula
Medtr0024s0080 2.0kb upstream 2.0kb upstream 3239   true scaffold0024: 34619-37857 Medicago truncatula
Medtr0024s0080 2.0kb upstream 2.0kb upstream 2000   false scaffold0024: 35858-37857 Medicago truncatula
Medtr0024s0080 2.0kb downstream 2.0kb downstream 3239   true scaffold0024: 32619-35857 Medicago truncatula
Medtr0024s0080 2.0kb downstream 2.0kb downstream 2000   false scaffold0024: 32619-34618 Medicago truncatula
Medtr0024s0080 5.0kb upstream 5.0kb upstream 6239   true scaffold0024: 34619-40857 Medicago truncatula
Medtr0024s0080 5.0kb upstream 5.0kb upstream 5000   false scaffold0024: 35858-40857 Medicago truncatula
Medtr0024s0080 5.0kb downstream 5.0kb downstream 6239   true scaffold0024: 29619-35857 Medicago truncatula
Medtr0024s0080 5.0kb downstream 5.0kb downstream 5000   false scaffold0024: 29619-34618 Medicago truncatula
Medtr0024s0080 10.0kb upstream 10.0kb upstream 11239   true scaffold0024: 34619-45857 Medicago truncatula
Medtr0024s0080 10.0kb upstream 10.0kb upstream 10000   false scaffold0024: 35858-45857 Medicago truncatula
Medtr0024s0080 10.0kb downstream 10.0kb downstream 11239   true scaffold0024: 24619-35857 Medicago truncatula
Medtr0024s0080 10.0kb downstream 10.0kb downstream 10000   false scaffold0024: 24619-34618 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314781 5265 Fabidae View MSA
124074599 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.527        
cufflinks 1.388        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.6        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.929        
cufflinks 0.054     Low Low

0 Strain