Gene : Medtr8g446430 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10217//PTHR10217:SF520 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL Description:  inwardly rectifying potassium channel subunit
Genomic Order:  2315 Name:  ? Medtr8g446430
Secondary Identifier:  ? PAC:31070340
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g446430 0.5kb upstream 0.5kb upstream 8578   true chr8: 18164208-18172785 Medicago truncatula
Medtr8g446430 0.5kb upstream 0.5kb upstream 500   false chr8: 18172286-18172785 Medicago truncatula
Medtr8g446430 0.5kb downstream 0.5kb downstream 8578   true chr8: 18163708-18172285 Medicago truncatula
Medtr8g446430 0.5kb downstream 0.5kb downstream 500   false chr8: 18163708-18164207 Medicago truncatula
Medtr8g446430 1.0kb upstream 1.0kb upstream 9078   true chr8: 18164208-18173285 Medicago truncatula
Medtr8g446430 1.0kb upstream 1.0kb upstream 1000   false chr8: 18172286-18173285 Medicago truncatula
Medtr8g446430 1.0kb downstream 1.0kb downstream 9078   true chr8: 18163208-18172285 Medicago truncatula
Medtr8g446430 1.0kb downstream 1.0kb downstream 1000   false chr8: 18163208-18164207 Medicago truncatula
Medtr8g446430 2.0kb upstream 2.0kb upstream 10078   true chr8: 18164208-18174285 Medicago truncatula
Medtr8g446430 2.0kb upstream 2.0kb upstream 2000   false chr8: 18172286-18174285 Medicago truncatula
Medtr8g446430 2.0kb downstream 2.0kb downstream 10078   true chr8: 18162208-18172285 Medicago truncatula
Medtr8g446430 2.0kb downstream 2.0kb downstream 2000   false chr8: 18162208-18164207 Medicago truncatula
Medtr8g446430 5.0kb upstream 5.0kb upstream 13078   true chr8: 18164208-18177285 Medicago truncatula
Medtr8g446430 5.0kb upstream 5.0kb upstream 5000   false chr8: 18172286-18177285 Medicago truncatula
Medtr8g446430 5.0kb downstream 5.0kb downstream 13078   true chr8: 18159208-18172285 Medicago truncatula
Medtr8g446430 5.0kb downstream 5.0kb downstream 5000   false chr8: 18159208-18164207 Medicago truncatula
Medtr8g446430 10.0kb upstream 10.0kb upstream 18078   true chr8: 18164208-18182285 Medicago truncatula
Medtr8g446430 10.0kb upstream 10.0kb upstream 10000   false chr8: 18172286-18182285 Medicago truncatula
Medtr8g446430 10.0kb downstream 10.0kb downstream 18078   true chr8: 18154208-18172285 Medicago truncatula
Medtr8g446430 10.0kb downstream 10.0kb downstream 10000   false chr8: 18154208-18164207 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122294907 5265 Fabidae View MSA
124069116 5270 Rosid View MSA
123736390 5271 Pentapetalae View MSA
122788335 5272 Eudicot View MSA
122043816 5273 Angiosperm View MSA
121310193 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.02     Low  
cufflinks 1.393        
cufflinks 1.376        
cufflinks 0.009     Low Low
cufflinks 1.272        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low  
cufflinks 1.106        
cufflinks 0.037     Low  

0 Strain