Gene : Medtr8g461220 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22942:SF37 - DNA REPAIR PROTEIN RECA HOMOLOG 1, CHLOROPLASTIC Description:  DNA repair and recombination protein
Genomic Order:  2611 Name:  ? Medtr8g461220
Secondary Identifier:  ? PAC:31072828
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g461220 0.5kb upstream 0.5kb upstream 11551   true chr8: 21499546-21511096 Medicago truncatula
Medtr8g461220 0.5kb upstream 0.5kb upstream 500   false chr8: 21510597-21511096 Medicago truncatula
Medtr8g461220 0.5kb downstream 0.5kb downstream 11551   true chr8: 21499046-21510596 Medicago truncatula
Medtr8g461220 0.5kb downstream 0.5kb downstream 500   false chr8: 21499046-21499545 Medicago truncatula
Medtr8g461220 1.0kb upstream 1.0kb upstream 12051   true chr8: 21499546-21511596 Medicago truncatula
Medtr8g461220 1.0kb upstream 1.0kb upstream 1000   false chr8: 21510597-21511596 Medicago truncatula
Medtr8g461220 1.0kb downstream 1.0kb downstream 12051   true chr8: 21498546-21510596 Medicago truncatula
Medtr8g461220 1.0kb downstream 1.0kb downstream 1000   false chr8: 21498546-21499545 Medicago truncatula
Medtr8g461220 2.0kb upstream 2.0kb upstream 13051   true chr8: 21499546-21512596 Medicago truncatula
Medtr8g461220 2.0kb upstream 2.0kb upstream 2000   false chr8: 21510597-21512596 Medicago truncatula
Medtr8g461220 2.0kb downstream 2.0kb downstream 13051   true chr8: 21497546-21510596 Medicago truncatula
Medtr8g461220 2.0kb downstream 2.0kb downstream 2000   false chr8: 21497546-21499545 Medicago truncatula
Medtr8g461220 5.0kb upstream 5.0kb upstream 16051   true chr8: 21499546-21515596 Medicago truncatula
Medtr8g461220 5.0kb upstream 5.0kb upstream 5000   false chr8: 21510597-21515596 Medicago truncatula
Medtr8g461220 5.0kb downstream 5.0kb downstream 16051   true chr8: 21494546-21510596 Medicago truncatula
Medtr8g461220 5.0kb downstream 5.0kb downstream 5000   false chr8: 21494546-21499545 Medicago truncatula
Medtr8g461220 10.0kb upstream 10.0kb upstream 21051   true chr8: 21499546-21520596 Medicago truncatula
Medtr8g461220 10.0kb upstream 10.0kb upstream 10000   false chr8: 21510597-21520596 Medicago truncatula
Medtr8g461220 10.0kb downstream 10.0kb downstream 21051   true chr8: 21489546-21510596 Medicago truncatula
Medtr8g461220 10.0kb downstream 10.0kb downstream 10000   false chr8: 21489546-21499545 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308582 5265 Fabidae View MSA
124064590 5270 Rosid View MSA
123740564 5271 Pentapetalae View MSA
122789040 5272 Eudicot View MSA
122042524 5273 Angiosperm View MSA
121345028 5274 Embryophyte View MSA
123425276 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.386        
cufflinks 0.466        
cufflinks 0.434        
cufflinks 0.157       Low
cufflinks 0.942       High
cufflinks 0.13     Low Low
cufflinks 0.39        
cufflinks 0.421        
cufflinks 0.241        

0 Strain