Gene : Medtr8g447090 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF00628//PF13871//PF13872 - PHD-finger (PHD) // C-terminal domain on Strawberry notch homologue (Helicase_C_4) // P-loop containing NTP hydrolase pore-1 (AAA_34) Description:  RING/FYVE/PHD zinc finger protein
Genomic Order:  2353 Name:  ? Medtr8g447090
Secondary Identifier:  ? PAC:31075385
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g447090 0.5kb upstream 0.5kb upstream 21299   true chr8: 18454662-18475960 Medicago truncatula
Medtr8g447090 0.5kb upstream 0.5kb upstream 500   false chr8: 18475461-18475960 Medicago truncatula
Medtr8g447090 0.5kb downstream 0.5kb downstream 21299   true chr8: 18454162-18475460 Medicago truncatula
Medtr8g447090 0.5kb downstream 0.5kb downstream 500   false chr8: 18454162-18454661 Medicago truncatula
Medtr8g447090 1.0kb upstream 1.0kb upstream 21799   true chr8: 18454662-18476460 Medicago truncatula
Medtr8g447090 1.0kb upstream 1.0kb upstream 1000   false chr8: 18475461-18476460 Medicago truncatula
Medtr8g447090 1.0kb downstream 1.0kb downstream 21799   true chr8: 18453662-18475460 Medicago truncatula
Medtr8g447090 1.0kb downstream 1.0kb downstream 1000   false chr8: 18453662-18454661 Medicago truncatula
Medtr8g447090 2.0kb upstream 2.0kb upstream 22799   true chr8: 18454662-18477460 Medicago truncatula
Medtr8g447090 2.0kb upstream 2.0kb upstream 2000   false chr8: 18475461-18477460 Medicago truncatula
Medtr8g447090 2.0kb downstream 2.0kb downstream 22799   true chr8: 18452662-18475460 Medicago truncatula
Medtr8g447090 2.0kb downstream 2.0kb downstream 2000   false chr8: 18452662-18454661 Medicago truncatula
Medtr8g447090 5.0kb upstream 5.0kb upstream 25799   true chr8: 18454662-18480460 Medicago truncatula
Medtr8g447090 5.0kb upstream 5.0kb upstream 5000   false chr8: 18475461-18480460 Medicago truncatula
Medtr8g447090 5.0kb downstream 5.0kb downstream 25799   true chr8: 18449662-18475460 Medicago truncatula
Medtr8g447090 5.0kb downstream 5.0kb downstream 5000   false chr8: 18449662-18454661 Medicago truncatula
Medtr8g447090 10.0kb upstream 10.0kb upstream 30799   true chr8: 18454662-18485460 Medicago truncatula
Medtr8g447090 10.0kb upstream 10.0kb upstream 10000   false chr8: 18475461-18485460 Medicago truncatula
Medtr8g447090 10.0kb downstream 10.0kb downstream 30799   true chr8: 18444662-18475460 Medicago truncatula
Medtr8g447090 10.0kb downstream 10.0kb downstream 10000   false chr8: 18444662-18454661 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299514 5265 Fabidae View MSA
124065554 5270 Rosid View MSA
123742096 5271 Pentapetalae View MSA
122786510 5272 Eudicot View MSA
122045253 5273 Angiosperm View MSA
121344716 5274 Embryophyte View MSA
123424908 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.959        
cufflinks 1.581        
cufflinks 1.271        
cufflinks 0.347       Low
cufflinks 2.189       High
cufflinks 0.195       Low
cufflinks 0.594        
cufflinks 1.176        
cufflinks 0.664        

0 Strain