Gene : Medtr8g464820 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR14145:SF1 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 6 Description:  glyceraldehyde-3-phosphate dehydrogenase
Genomic Order:  2731 Name:  ? Medtr8g464820
Secondary Identifier:  ? PAC:31071647
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7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula ANAEROFRUCAT-PWY Medicago truncatula pathologic  
Mtruncatula ANAGLYCOLYSIS-PWY Medicago truncatula pathologic  
Mtruncatula GLUCONEO-PWY Medicago truncatula pathologic  
Mtruncatula PWY-1042 Medicago truncatula pathologic  
Mtruncatula PWY-5464 Medicago truncatula pathologic  
Mtruncatula PWY66-399 Medicago truncatula pathologic  
Mtruncatula SUCSYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g464820 0.5kb upstream 0.5kb upstream 3276   true chr8: 22976088-22979363 Medicago truncatula
Medtr8g464820 0.5kb upstream 0.5kb upstream 500   false chr8: 22976088-22976587 Medicago truncatula
Medtr8g464820 0.5kb downstream 0.5kb downstream 3276   true chr8: 22976588-22979863 Medicago truncatula
Medtr8g464820 0.5kb downstream 0.5kb downstream 500   false chr8: 22979364-22979863 Medicago truncatula
Medtr8g464820 1.0kb upstream 1.0kb upstream 3776   true chr8: 22975588-22979363 Medicago truncatula
Medtr8g464820 1.0kb upstream 1.0kb upstream 1000   false chr8: 22975588-22976587 Medicago truncatula
Medtr8g464820 1.0kb downstream 1.0kb downstream 3776   true chr8: 22976588-22980363 Medicago truncatula
Medtr8g464820 1.0kb downstream 1.0kb downstream 1000   false chr8: 22979364-22980363 Medicago truncatula
Medtr8g464820 2.0kb upstream 2.0kb upstream 4776   true chr8: 22974588-22979363 Medicago truncatula
Medtr8g464820 2.0kb upstream 2.0kb upstream 2000   false chr8: 22974588-22976587 Medicago truncatula
Medtr8g464820 2.0kb downstream 2.0kb downstream 4776   true chr8: 22976588-22981363 Medicago truncatula
Medtr8g464820 2.0kb downstream 2.0kb downstream 2000   false chr8: 22979364-22981363 Medicago truncatula
Medtr8g464820 5.0kb upstream 5.0kb upstream 7776   true chr8: 22971588-22979363 Medicago truncatula
Medtr8g464820 5.0kb upstream 5.0kb upstream 5000   false chr8: 22971588-22976587 Medicago truncatula
Medtr8g464820 5.0kb downstream 5.0kb downstream 7776   true chr8: 22976588-22984363 Medicago truncatula
Medtr8g464820 5.0kb downstream 5.0kb downstream 5000   false chr8: 22979364-22984363 Medicago truncatula
Medtr8g464820 10.0kb upstream 10.0kb upstream 12776   true chr8: 22966588-22979363 Medicago truncatula
Medtr8g464820 10.0kb upstream 10.0kb upstream 10000   false chr8: 22966588-22976587 Medicago truncatula
Medtr8g464820 10.0kb downstream 10.0kb downstream 12776   true chr8: 22976588-22989363 Medicago truncatula
Medtr8g464820 10.0kb downstream 10.0kb downstream 10000   false chr8: 22979364-22989363 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122271945 5265 Fabidae View MSA
124041552 5270 Rosid View MSA
123757322 5271 Pentapetalae View MSA
122778384 5272 Eudicot View MSA
122052119 5273 Angiosperm View MSA
121312977 5274 Embryophyte View MSA
123350111 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.282       High
cufflinks 1.525        
cufflinks 1.365        
cufflinks 3.545       High
cufflinks 1.477        
cufflinks 2.44        
cufflinks 1.193        
cufflinks 1.031       Low
cufflinks 2.466        

0 Strain