Gene : Medtr8g467180 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR22950//PTHR22950:SF246 - AMINO ACID TRANSPORTER Description:  transmembrane amino acid transporter family protein
Genomic Order:  2838 Name:  ? Medtr8g467180
Secondary Identifier:  ? PAC:31071706
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g467180 0.5kb upstream 0.5kb upstream 3688   true chr8: 24062967-24066654 Medicago truncatula
Medtr8g467180 0.5kb upstream 0.5kb upstream 500   false chr8: 24066155-24066654 Medicago truncatula
Medtr8g467180 0.5kb downstream 0.5kb downstream 3688   true chr8: 24062467-24066154 Medicago truncatula
Medtr8g467180 0.5kb downstream 0.5kb downstream 500   false chr8: 24062467-24062966 Medicago truncatula
Medtr8g467180 1.0kb upstream 1.0kb upstream 4188   true chr8: 24062967-24067154 Medicago truncatula
Medtr8g467180 1.0kb upstream 1.0kb upstream 1000   false chr8: 24066155-24067154 Medicago truncatula
Medtr8g467180 1.0kb downstream 1.0kb downstream 4188   true chr8: 24061967-24066154 Medicago truncatula
Medtr8g467180 1.0kb downstream 1.0kb downstream 1000   false chr8: 24061967-24062966 Medicago truncatula
Medtr8g467180 2.0kb upstream 2.0kb upstream 5188   true chr8: 24062967-24068154 Medicago truncatula
Medtr8g467180 2.0kb upstream 2.0kb upstream 2000   false chr8: 24066155-24068154 Medicago truncatula
Medtr8g467180 2.0kb downstream 2.0kb downstream 5188   true chr8: 24060967-24066154 Medicago truncatula
Medtr8g467180 2.0kb downstream 2.0kb downstream 2000   false chr8: 24060967-24062966 Medicago truncatula
Medtr8g467180 5.0kb upstream 5.0kb upstream 8188   true chr8: 24062967-24071154 Medicago truncatula
Medtr8g467180 5.0kb upstream 5.0kb upstream 5000   false chr8: 24066155-24071154 Medicago truncatula
Medtr8g467180 5.0kb downstream 5.0kb downstream 8188   true chr8: 24057967-24066154 Medicago truncatula
Medtr8g467180 5.0kb downstream 5.0kb downstream 5000   false chr8: 24057967-24062966 Medicago truncatula
Medtr8g467180 10.0kb upstream 10.0kb upstream 13188   true chr8: 24062967-24076154 Medicago truncatula
Medtr8g467180 10.0kb upstream 10.0kb upstream 10000   false chr8: 24066155-24076154 Medicago truncatula
Medtr8g467180 10.0kb downstream 10.0kb downstream 13188   true chr8: 24052967-24066154 Medicago truncatula
Medtr8g467180 10.0kb downstream 10.0kb downstream 10000   false chr8: 24052967-24062966 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041365 5273 Angiosperm View MSA
122310179 5265 Fabidae View MSA
124070612 5270 Rosid View MSA
123742441 5271 Pentapetalae View MSA
122795032 5272 Eudicot View MSA
123429000 5275 Viridiplantae View MSA
121349038 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.496        
cufflinks 0.329        
cufflinks 0.366        
cufflinks 0.046     Low Low
cufflinks 0.724       High
cufflinks 0.077     Low  
cufflinks 0.115        
cufflinks 0.209        
cufflinks 0.038     Low Low

0 Strain