Gene : Medtr8g467540 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10794:SF53 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Description:  CAAX amino terminal protease family protein
Genomic Order:  2858 Name:  ? Medtr8g467540
Secondary Identifier:  ? PAC:31074861
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g467540 0.5kb upstream 0.5kb upstream 14821   true chr8: 24281410-24296230 Medicago truncatula
Medtr8g467540 0.5kb upstream 0.5kb upstream 500   false chr8: 24295731-24296230 Medicago truncatula
Medtr8g467540 0.5kb downstream 0.5kb downstream 14821   true chr8: 24280910-24295730 Medicago truncatula
Medtr8g467540 0.5kb downstream 0.5kb downstream 500   false chr8: 24280910-24281409 Medicago truncatula
Medtr8g467540 1.0kb upstream 1.0kb upstream 15321   true chr8: 24281410-24296730 Medicago truncatula
Medtr8g467540 1.0kb upstream 1.0kb upstream 1000   false chr8: 24295731-24296730 Medicago truncatula
Medtr8g467540 1.0kb downstream 1.0kb downstream 15321   true chr8: 24280410-24295730 Medicago truncatula
Medtr8g467540 1.0kb downstream 1.0kb downstream 1000   false chr8: 24280410-24281409 Medicago truncatula
Medtr8g467540 2.0kb upstream 2.0kb upstream 16321   true chr8: 24281410-24297730 Medicago truncatula
Medtr8g467540 2.0kb upstream 2.0kb upstream 2000   false chr8: 24295731-24297730 Medicago truncatula
Medtr8g467540 2.0kb downstream 2.0kb downstream 16321   true chr8: 24279410-24295730 Medicago truncatula
Medtr8g467540 2.0kb downstream 2.0kb downstream 2000   false chr8: 24279410-24281409 Medicago truncatula
Medtr8g467540 5.0kb upstream 5.0kb upstream 19321   true chr8: 24281410-24300730 Medicago truncatula
Medtr8g467540 5.0kb upstream 5.0kb upstream 5000   false chr8: 24295731-24300730 Medicago truncatula
Medtr8g467540 5.0kb downstream 5.0kb downstream 19321   true chr8: 24276410-24295730 Medicago truncatula
Medtr8g467540 5.0kb downstream 5.0kb downstream 5000   false chr8: 24276410-24281409 Medicago truncatula
Medtr8g467540 10.0kb upstream 10.0kb upstream 24321   true chr8: 24281410-24305730 Medicago truncatula
Medtr8g467540 10.0kb upstream 10.0kb upstream 10000   false chr8: 24295731-24305730 Medicago truncatula
Medtr8g467540 10.0kb downstream 10.0kb downstream 24321   true chr8: 24271410-24295730 Medicago truncatula
Medtr8g467540 10.0kb downstream 10.0kb downstream 10000   false chr8: 24271410-24281409 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305816 5265 Fabidae View MSA
124063785 5270 Rosid View MSA
123740423 5271 Pentapetalae View MSA
122790684 5272 Eudicot View MSA
122042712 5273 Angiosperm View MSA
121349023 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.056     Low  
cufflinks 1.817       High
cufflinks 1.398        
cufflinks 0.044     Low  
cufflinks 2.262       High
cufflinks 0.044     Low  
cufflinks 0.042     Low  
cufflinks 1.826       High
cufflinks 0.074     Low  

0 Strain