Gene : Medtr8g005070 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  5
Name:  ? Medtr8g005070 Secondary Identifier:  ? PAC:31070248
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g005070 0.5kb upstream 0.5kb upstream 1884   true chr8: 34068-35951 Medicago truncatula
Medtr8g005070 0.5kb upstream 0.5kb upstream 500   false chr8: 35452-35951 Medicago truncatula
Medtr8g005070 0.5kb downstream 0.5kb downstream 1884   true chr8: 33568-35451 Medicago truncatula
Medtr8g005070 0.5kb downstream 0.5kb downstream 500   false chr8: 33568-34067 Medicago truncatula
Medtr8g005070 1.0kb upstream 1.0kb upstream 2384   true chr8: 34068-36451 Medicago truncatula
Medtr8g005070 1.0kb upstream 1.0kb upstream 1000   false chr8: 35452-36451 Medicago truncatula
Medtr8g005070 1.0kb downstream 1.0kb downstream 2384   true chr8: 33068-35451 Medicago truncatula
Medtr8g005070 1.0kb downstream 1.0kb downstream 1000   false chr8: 33068-34067 Medicago truncatula
Medtr8g005070 2.0kb upstream 2.0kb upstream 3384   true chr8: 34068-37451 Medicago truncatula
Medtr8g005070 2.0kb upstream 2.0kb upstream 2000   false chr8: 35452-37451 Medicago truncatula
Medtr8g005070 2.0kb downstream 2.0kb downstream 3384   true chr8: 32068-35451 Medicago truncatula
Medtr8g005070 2.0kb downstream 2.0kb downstream 2000   false chr8: 32068-34067 Medicago truncatula
Medtr8g005070 5.0kb upstream 5.0kb upstream 6384   true chr8: 34068-40451 Medicago truncatula
Medtr8g005070 5.0kb upstream 5.0kb upstream 5000   false chr8: 35452-40451 Medicago truncatula
Medtr8g005070 5.0kb downstream 5.0kb downstream 6384   true chr8: 29068-35451 Medicago truncatula
Medtr8g005070 5.0kb downstream 5.0kb downstream 5000   false chr8: 29068-34067 Medicago truncatula
Medtr8g005070 10.0kb upstream 10.0kb upstream 11384   true chr8: 34068-45451 Medicago truncatula
Medtr8g005070 10.0kb upstream 10.0kb upstream 10000   false chr8: 35452-45451 Medicago truncatula
Medtr8g005070 10.0kb downstream 10.0kb downstream 11384   true chr8: 24068-35451 Medicago truncatula
Medtr8g005070 10.0kb downstream 10.0kb downstream 10000   false chr8: 24068-34067 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028589 5273 Angiosperm View MSA
122299189 5265 Fabidae View MSA
124070165 5270 Rosid View MSA
123747367 5271 Pentapetalae View MSA
122797380 5272 Eudicot View MSA
121298053 5274 Embryophyte View MSA
123336056 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.609        
cufflinks 12.99     High  
cufflinks 18.388     High High
cufflinks 11.086     High  
cufflinks 16.133     High  
cufflinks 4.402       Low
cufflinks 6.59        
cufflinks 16.532     High  
cufflinks 6.836        

0 Strain