Gene : Medtr8g005040 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23324//PTHR23324:SF45 - SEC14 RELATED PROTEIN Description:  serpin, putative
Genomic Order:  3 Name:  ? Medtr8g005040
Secondary Identifier:  ? PAC:31071668
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g005040 0.5kb upstream 0.5kb upstream 8804   true chr8: 12952-21755 Medicago truncatula
Medtr8g005040 0.5kb upstream 0.5kb upstream 500   false chr8: 21256-21755 Medicago truncatula
Medtr8g005040 0.5kb downstream 0.5kb downstream 8804   true chr8: 12452-21255 Medicago truncatula
Medtr8g005040 0.5kb downstream 0.5kb downstream 500   false chr8: 12452-12951 Medicago truncatula
Medtr8g005040 1.0kb upstream 1.0kb upstream 9304   true chr8: 12952-22255 Medicago truncatula
Medtr8g005040 1.0kb upstream 1.0kb upstream 1000   false chr8: 21256-22255 Medicago truncatula
Medtr8g005040 1.0kb downstream 1.0kb downstream 9304   true chr8: 11952-21255 Medicago truncatula
Medtr8g005040 1.0kb downstream 1.0kb downstream 1000   false chr8: 11952-12951 Medicago truncatula
Medtr8g005040 2.0kb upstream 2.0kb upstream 10304   true chr8: 12952-23255 Medicago truncatula
Medtr8g005040 2.0kb upstream 2.0kb upstream 2000   false chr8: 21256-23255 Medicago truncatula
Medtr8g005040 2.0kb downstream 2.0kb downstream 10304   true chr8: 10952-21255 Medicago truncatula
Medtr8g005040 2.0kb downstream 2.0kb downstream 2000   false chr8: 10952-12951 Medicago truncatula
Medtr8g005040 5.0kb upstream 5.0kb upstream 13304   true chr8: 12952-26255 Medicago truncatula
Medtr8g005040 5.0kb upstream 5.0kb upstream 5000   false chr8: 21256-26255 Medicago truncatula
Medtr8g005040 5.0kb downstream 5.0kb downstream 13304   true chr8: 7952-21255 Medicago truncatula
Medtr8g005040 5.0kb downstream 5.0kb downstream 5000   false chr8: 7952-12951 Medicago truncatula
Medtr8g005040 10.0kb upstream 10.0kb upstream 18304   true chr8: 12952-31255 Medicago truncatula
Medtr8g005040 10.0kb upstream 10.0kb upstream 10000   false chr8: 21256-31255 Medicago truncatula
Medtr8g005040 10.0kb downstream 10.0kb downstream 18304   true chr8: 2952-21255 Medicago truncatula
Medtr8g005040 10.0kb downstream 10.0kb downstream 10000   false chr8: 2952-12951 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026525 5273 Angiosperm View MSA
122300278 5265 Fabidae View MSA
124063950 5270 Rosid View MSA
123740798 5271 Pentapetalae View MSA
122786115 5272 Eudicot View MSA
121346667 5274 Embryophyte View MSA
123426655 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.617        
cufflinks 8.116        
cufflinks 6.052        
cufflinks 2.402       Low
cufflinks 7.689        
cufflinks 3.733       Low
cufflinks 5.927        
cufflinks 6.013        
cufflinks 5.865        

0 Strain