Gene : Medtr8g471150 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR18937//PTHR18937:SF222 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER Description:  basic helix loop helix protein, putative
Genomic Order:  3448 Name:  ? Medtr8g471150
Secondary Identifier:  ? PAC:31072445
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g471150 0.5kb upstream 0.5kb upstream 4083   true chr8: 28761936-28766018 Medicago truncatula
Medtr8g471150 0.5kb upstream 0.5kb upstream 500   false chr8: 28761936-28762435 Medicago truncatula
Medtr8g471150 0.5kb downstream 0.5kb downstream 4083   true chr8: 28762436-28766518 Medicago truncatula
Medtr8g471150 0.5kb downstream 0.5kb downstream 500   false chr8: 28766019-28766518 Medicago truncatula
Medtr8g471150 1.0kb upstream 1.0kb upstream 4583   true chr8: 28761436-28766018 Medicago truncatula
Medtr8g471150 1.0kb upstream 1.0kb upstream 1000   false chr8: 28761436-28762435 Medicago truncatula
Medtr8g471150 1.0kb downstream 1.0kb downstream 4583   true chr8: 28762436-28767018 Medicago truncatula
Medtr8g471150 1.0kb downstream 1.0kb downstream 1000   false chr8: 28766019-28767018 Medicago truncatula
Medtr8g471150 2.0kb upstream 2.0kb upstream 5583   true chr8: 28760436-28766018 Medicago truncatula
Medtr8g471150 2.0kb upstream 2.0kb upstream 2000   false chr8: 28760436-28762435 Medicago truncatula
Medtr8g471150 2.0kb downstream 2.0kb downstream 5583   true chr8: 28762436-28768018 Medicago truncatula
Medtr8g471150 2.0kb downstream 2.0kb downstream 2000   false chr8: 28766019-28768018 Medicago truncatula
Medtr8g471150 5.0kb upstream 5.0kb upstream 8583   true chr8: 28757436-28766018 Medicago truncatula
Medtr8g471150 5.0kb upstream 5.0kb upstream 5000   false chr8: 28757436-28762435 Medicago truncatula
Medtr8g471150 5.0kb downstream 5.0kb downstream 8583   true chr8: 28762436-28771018 Medicago truncatula
Medtr8g471150 5.0kb downstream 5.0kb downstream 5000   false chr8: 28766019-28771018 Medicago truncatula
Medtr8g471150 10.0kb upstream 10.0kb upstream 13583   true chr8: 28752436-28766018 Medicago truncatula
Medtr8g471150 10.0kb upstream 10.0kb upstream 10000   false chr8: 28752436-28762435 Medicago truncatula
Medtr8g471150 10.0kb downstream 10.0kb downstream 13583   true chr8: 28762436-28776018 Medicago truncatula
Medtr8g471150 10.0kb downstream 10.0kb downstream 10000   false chr8: 28766019-28776018 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041045 5273 Angiosperm View MSA
122300642 5265 Fabidae View MSA
124073279 5270 Rosid View MSA
123750946 5271 Pentapetalae View MSA
122787663 5272 Eudicot View MSA
121351089 5274 Embryophyte View MSA
123382004 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.069        
cufflinks 0.142        
cufflinks 0.173        
cufflinks 0.007     Low Low
cufflinks 0.24        
cufflinks 0.665       High
cufflinks 0.193        
cufflinks 0.167        
cufflinks 0.191        

0 Strain