Gene : Medtr8g103380 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13547:SF3 - PROTEINACEOUS RNASE P 1, CHLOROPLASTIC/MITOCHONDRIAL Description:  Zc3h12a-like ribonuclease NYN domain protein
Genomic Order:  5501 Name:  ? Medtr8g103380
Secondary Identifier:  ? PAC:31071539
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g103380 0.5kb upstream 0.5kb upstream 4815   true chr8: 43497327-43502141 Medicago truncatula
Medtr8g103380 0.5kb upstream 0.5kb upstream 500   false chr8: 43497327-43497826 Medicago truncatula
Medtr8g103380 0.5kb downstream 0.5kb downstream 4815   true chr8: 43497827-43502641 Medicago truncatula
Medtr8g103380 0.5kb downstream 0.5kb downstream 500   false chr8: 43502142-43502641 Medicago truncatula
Medtr8g103380 1.0kb upstream 1.0kb upstream 5315   true chr8: 43496827-43502141 Medicago truncatula
Medtr8g103380 1.0kb upstream 1.0kb upstream 1000   false chr8: 43496827-43497826 Medicago truncatula
Medtr8g103380 1.0kb downstream 1.0kb downstream 5315   true chr8: 43497827-43503141 Medicago truncatula
Medtr8g103380 1.0kb downstream 1.0kb downstream 1000   false chr8: 43502142-43503141 Medicago truncatula
Medtr8g103380 2.0kb upstream 2.0kb upstream 6315   true chr8: 43495827-43502141 Medicago truncatula
Medtr8g103380 2.0kb upstream 2.0kb upstream 2000   false chr8: 43495827-43497826 Medicago truncatula
Medtr8g103380 2.0kb downstream 2.0kb downstream 6315   true chr8: 43497827-43504141 Medicago truncatula
Medtr8g103380 2.0kb downstream 2.0kb downstream 2000   false chr8: 43502142-43504141 Medicago truncatula
Medtr8g103380 5.0kb upstream 5.0kb upstream 9315   true chr8: 43492827-43502141 Medicago truncatula
Medtr8g103380 5.0kb upstream 5.0kb upstream 5000   false chr8: 43492827-43497826 Medicago truncatula
Medtr8g103380 5.0kb downstream 5.0kb downstream 9315   true chr8: 43497827-43507141 Medicago truncatula
Medtr8g103380 5.0kb downstream 5.0kb downstream 5000   false chr8: 43502142-43507141 Medicago truncatula
Medtr8g103380 10.0kb upstream 10.0kb upstream 14315   true chr8: 43487827-43502141 Medicago truncatula
Medtr8g103380 10.0kb upstream 10.0kb upstream 10000   false chr8: 43487827-43497826 Medicago truncatula
Medtr8g103380 10.0kb downstream 10.0kb downstream 14315   true chr8: 43497827-43512141 Medicago truncatula
Medtr8g103380 10.0kb downstream 10.0kb downstream 10000   false chr8: 43502142-43512141 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310922 5265 Fabidae View MSA
124069994 5270 Rosid View MSA
123742541 5271 Pentapetalae View MSA
122794847 5272 Eudicot View MSA
122048517 5273 Angiosperm View MSA
121348403 5274 Embryophyte View MSA
123426144 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.391        
cufflinks 1.795        
cufflinks 1.797        
cufflinks 0.062     Low Low
cufflinks 2.621       High
cufflinks 0.078     Low Low
cufflinks 0.193        
cufflinks 1.9        
cufflinks 0.119        

0 Strain