Gene : Medtr8g103320 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12446:SF14 - PROTEIN LIN-54 HOMOLOG Description:  tesmin/TSO1-like CXC domain protein
Genomic Order:  5497 Name:  ? Medtr8g103320
Secondary Identifier:  ? PAC:31076154
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g103320 0.5kb upstream 0.5kb upstream 5311   true chr8: 43471429-43476739 Medicago truncatula
Medtr8g103320 0.5kb upstream 0.5kb upstream 500   false chr8: 43471429-43471928 Medicago truncatula
Medtr8g103320 0.5kb downstream 0.5kb downstream 5311   true chr8: 43471929-43477239 Medicago truncatula
Medtr8g103320 0.5kb downstream 0.5kb downstream 500   false chr8: 43476740-43477239 Medicago truncatula
Medtr8g103320 1.0kb upstream 1.0kb upstream 5811   true chr8: 43470929-43476739 Medicago truncatula
Medtr8g103320 1.0kb upstream 1.0kb upstream 1000   false chr8: 43470929-43471928 Medicago truncatula
Medtr8g103320 1.0kb downstream 1.0kb downstream 5811   true chr8: 43471929-43477739 Medicago truncatula
Medtr8g103320 1.0kb downstream 1.0kb downstream 1000   false chr8: 43476740-43477739 Medicago truncatula
Medtr8g103320 2.0kb upstream 2.0kb upstream 6811   true chr8: 43469929-43476739 Medicago truncatula
Medtr8g103320 2.0kb upstream 2.0kb upstream 2000   false chr8: 43469929-43471928 Medicago truncatula
Medtr8g103320 2.0kb downstream 2.0kb downstream 6811   true chr8: 43471929-43478739 Medicago truncatula
Medtr8g103320 2.0kb downstream 2.0kb downstream 2000   false chr8: 43476740-43478739 Medicago truncatula
Medtr8g103320 5.0kb upstream 5.0kb upstream 9811   true chr8: 43466929-43476739 Medicago truncatula
Medtr8g103320 5.0kb upstream 5.0kb upstream 5000   false chr8: 43466929-43471928 Medicago truncatula
Medtr8g103320 5.0kb downstream 5.0kb downstream 9811   true chr8: 43471929-43481739 Medicago truncatula
Medtr8g103320 5.0kb downstream 5.0kb downstream 5000   false chr8: 43476740-43481739 Medicago truncatula
Medtr8g103320 10.0kb upstream 10.0kb upstream 14811   true chr8: 43461929-43476739 Medicago truncatula
Medtr8g103320 10.0kb upstream 10.0kb upstream 10000   false chr8: 43461929-43471928 Medicago truncatula
Medtr8g103320 10.0kb downstream 10.0kb downstream 14811   true chr8: 43471929-43486739 Medicago truncatula
Medtr8g103320 10.0kb downstream 10.0kb downstream 10000   false chr8: 43476740-43486739 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295899 5265 Fabidae View MSA
124069206 5270 Rosid View MSA
123746618 5271 Pentapetalae View MSA
122795390 5272 Eudicot View MSA
122042831 5273 Angiosperm View MSA
121349847 5274 Embryophyte View MSA
123426596 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.6        
cufflinks 0.996        
cufflinks 1.484       High
cufflinks 0.574        
cufflinks 0.949        
cufflinks 0.18       Low
cufflinks 0.424        
cufflinks 1.001        
cufflinks 0.484        

0 Strain