Gene : Medtr8g103227 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22849//PTHR22849:SF13 - WDSAM1 PROTEIN Description:  E3 ubiquitin-protein ligase LIN-like protein, putative
Genomic Order:  5493 Name:  ? Medtr8g103227
Secondary Identifier:  ? PAC:31071313
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7511 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g103227 0.5kb upstream 0.5kb upstream 7929   true chr8: 43449053-43456981 Medicago truncatula
Medtr8g103227 0.5kb upstream 0.5kb upstream 500   false chr8: 43449053-43449552 Medicago truncatula
Medtr8g103227 0.5kb downstream 0.5kb downstream 7929   true chr8: 43449553-43457481 Medicago truncatula
Medtr8g103227 0.5kb downstream 0.5kb downstream 500   false chr8: 43456982-43457481 Medicago truncatula
Medtr8g103227 1.0kb upstream 1.0kb upstream 8429   true chr8: 43448553-43456981 Medicago truncatula
Medtr8g103227 1.0kb upstream 1.0kb upstream 1000   false chr8: 43448553-43449552 Medicago truncatula
Medtr8g103227 1.0kb downstream 1.0kb downstream 8429   true chr8: 43449553-43457981 Medicago truncatula
Medtr8g103227 1.0kb downstream 1.0kb downstream 1000   false chr8: 43456982-43457981 Medicago truncatula
Medtr8g103227 2.0kb upstream 2.0kb upstream 9429   true chr8: 43447553-43456981 Medicago truncatula
Medtr8g103227 2.0kb upstream 2.0kb upstream 2000   false chr8: 43447553-43449552 Medicago truncatula
Medtr8g103227 2.0kb downstream 2.0kb downstream 9429   true chr8: 43449553-43458981 Medicago truncatula
Medtr8g103227 2.0kb downstream 2.0kb downstream 2000   false chr8: 43456982-43458981 Medicago truncatula
Medtr8g103227 5.0kb upstream 5.0kb upstream 12429   true chr8: 43444553-43456981 Medicago truncatula
Medtr8g103227 5.0kb upstream 5.0kb upstream 5000   false chr8: 43444553-43449552 Medicago truncatula
Medtr8g103227 5.0kb downstream 5.0kb downstream 12429   true chr8: 43449553-43461981 Medicago truncatula
Medtr8g103227 5.0kb downstream 5.0kb downstream 5000   false chr8: 43456982-43461981 Medicago truncatula
Medtr8g103227 10.0kb upstream 10.0kb upstream 17429   true chr8: 43439553-43456981 Medicago truncatula
Medtr8g103227 10.0kb upstream 10.0kb upstream 10000   false chr8: 43439553-43449552 Medicago truncatula
Medtr8g103227 10.0kb downstream 10.0kb downstream 17429   true chr8: 43449553-43466981 Medicago truncatula
Medtr8g103227 10.0kb downstream 10.0kb downstream 10000   false chr8: 43456982-43466981 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306962 5265 Fabidae View MSA
124070413 5270 Rosid View MSA
123749740 5271 Pentapetalae View MSA
122795160 5272 Eudicot View MSA
122049229 5273 Angiosperm View MSA
121348338 5274 Embryophyte View MSA
123380824 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.058     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.016     Low  
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.001     Low Low
cufflinks 0.047     Low High

0 Strain