Gene : Medtr8g103950 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR14043 - CCAAT DISPLACEMENT PROTEIN-RELATED Description:  CASP carboxy-terminal protein
Genomic Order:  5547 Name:  ? Medtr8g103950
Secondary Identifier:  ? PAC:31074089
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g103950 0.5kb upstream 0.5kb upstream 9903   true chr8: 43753805-43763707 Medicago truncatula
Medtr8g103950 0.5kb upstream 0.5kb upstream 500   false chr8: 43763208-43763707 Medicago truncatula
Medtr8g103950 0.5kb downstream 0.5kb downstream 9903   true chr8: 43753305-43763207 Medicago truncatula
Medtr8g103950 0.5kb downstream 0.5kb downstream 500   false chr8: 43753305-43753804 Medicago truncatula
Medtr8g103950 1.0kb upstream 1.0kb upstream 10403   true chr8: 43753805-43764207 Medicago truncatula
Medtr8g103950 1.0kb upstream 1.0kb upstream 1000   false chr8: 43763208-43764207 Medicago truncatula
Medtr8g103950 1.0kb downstream 1.0kb downstream 10403   true chr8: 43752805-43763207 Medicago truncatula
Medtr8g103950 1.0kb downstream 1.0kb downstream 1000   false chr8: 43752805-43753804 Medicago truncatula
Medtr8g103950 2.0kb upstream 2.0kb upstream 11403   true chr8: 43753805-43765207 Medicago truncatula
Medtr8g103950 2.0kb upstream 2.0kb upstream 2000   false chr8: 43763208-43765207 Medicago truncatula
Medtr8g103950 2.0kb downstream 2.0kb downstream 11403   true chr8: 43751805-43763207 Medicago truncatula
Medtr8g103950 2.0kb downstream 2.0kb downstream 2000   false chr8: 43751805-43753804 Medicago truncatula
Medtr8g103950 5.0kb upstream 5.0kb upstream 14403   true chr8: 43753805-43768207 Medicago truncatula
Medtr8g103950 5.0kb upstream 5.0kb upstream 5000   false chr8: 43763208-43768207 Medicago truncatula
Medtr8g103950 5.0kb downstream 5.0kb downstream 14403   true chr8: 43748805-43763207 Medicago truncatula
Medtr8g103950 5.0kb downstream 5.0kb downstream 5000   false chr8: 43748805-43753804 Medicago truncatula
Medtr8g103950 10.0kb upstream 10.0kb upstream 19403   true chr8: 43753805-43773207 Medicago truncatula
Medtr8g103950 10.0kb upstream 10.0kb upstream 10000   false chr8: 43763208-43773207 Medicago truncatula
Medtr8g103950 10.0kb downstream 10.0kb downstream 19403   true chr8: 43743805-43763207 Medicago truncatula
Medtr8g103950 10.0kb downstream 10.0kb downstream 10000   false chr8: 43743805-43753804 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304272 5265 Fabidae View MSA
124062703 5270 Rosid View MSA
123746620 5271 Pentapetalae View MSA
122790206 5272 Eudicot View MSA
122042550 5273 Angiosperm View MSA
121344856 5274 Embryophyte View MSA
123425319 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.05        
cufflinks 3.52        
cufflinks 3.033        
cufflinks 0.928       Low
cufflinks 3.857       High
cufflinks 1.029       Low
cufflinks 1.3        
cufflinks 2.777        
cufflinks 0.857       Low

0 Strain