Gene : Medtr8g103870 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12121:SF41 - CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 3 Description:  carbon catabolite repressor-like protein
Genomic Order:  5539 Name:  ? Medtr8g103870
Secondary Identifier:  ? PAC:31075012
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g103870 0.5kb upstream 0.5kb upstream 5388   true chr8: 43713825-43719212 Medicago truncatula
Medtr8g103870 0.5kb upstream 0.5kb upstream 500   false chr8: 43718713-43719212 Medicago truncatula
Medtr8g103870 0.5kb downstream 0.5kb downstream 5388   true chr8: 43713325-43718712 Medicago truncatula
Medtr8g103870 0.5kb downstream 0.5kb downstream 500   false chr8: 43713325-43713824 Medicago truncatula
Medtr8g103870 1.0kb upstream 1.0kb upstream 5888   true chr8: 43713825-43719712 Medicago truncatula
Medtr8g103870 1.0kb upstream 1.0kb upstream 1000   false chr8: 43718713-43719712 Medicago truncatula
Medtr8g103870 1.0kb downstream 1.0kb downstream 5888   true chr8: 43712825-43718712 Medicago truncatula
Medtr8g103870 1.0kb downstream 1.0kb downstream 1000   false chr8: 43712825-43713824 Medicago truncatula
Medtr8g103870 2.0kb upstream 2.0kb upstream 6888   true chr8: 43713825-43720712 Medicago truncatula
Medtr8g103870 2.0kb upstream 2.0kb upstream 2000   false chr8: 43718713-43720712 Medicago truncatula
Medtr8g103870 2.0kb downstream 2.0kb downstream 6888   true chr8: 43711825-43718712 Medicago truncatula
Medtr8g103870 2.0kb downstream 2.0kb downstream 2000   false chr8: 43711825-43713824 Medicago truncatula
Medtr8g103870 5.0kb upstream 5.0kb upstream 9888   true chr8: 43713825-43723712 Medicago truncatula
Medtr8g103870 5.0kb upstream 5.0kb upstream 5000   false chr8: 43718713-43723712 Medicago truncatula
Medtr8g103870 5.0kb downstream 5.0kb downstream 9888   true chr8: 43708825-43718712 Medicago truncatula
Medtr8g103870 5.0kb downstream 5.0kb downstream 5000   false chr8: 43708825-43713824 Medicago truncatula
Medtr8g103870 10.0kb upstream 10.0kb upstream 14888   true chr8: 43713825-43728712 Medicago truncatula
Medtr8g103870 10.0kb upstream 10.0kb upstream 10000   false chr8: 43718713-43728712 Medicago truncatula
Medtr8g103870 10.0kb downstream 10.0kb downstream 14888   true chr8: 43703825-43718712 Medicago truncatula
Medtr8g103870 10.0kb downstream 10.0kb downstream 10000   false chr8: 43703825-43713824 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308895 5265 Fabidae View MSA
124063317 5270 Rosid View MSA
123750146 5271 Pentapetalae View MSA
122793805 5272 Eudicot View MSA
122047277 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.74        
cufflinks 2.73       High
cufflinks 1.84        
cufflinks 0.379       Low
cufflinks 3.619       High
cufflinks 0.357       Low
cufflinks 0.654        
cufflinks 2.452        
cufflinks 0.32       Low

0 Strain