Gene : Medtr8g103550 M. truncatula Mt4.0v1
Defline:  (1 of 5) KOG0092 - GTPase Rab5/YPT51 and related small G protein superfamily GTPases Description:  RAB GTPase-like protein A5B
Genomic Order:  5518 Name:  ? Medtr8g103550
Secondary Identifier:  ? PAC:31070618
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g103550 0.5kb upstream 0.5kb upstream 2802   true chr8: 43573270-43576071 Medicago truncatula
Medtr8g103550 0.5kb upstream 0.5kb upstream 500   false chr8: 43575572-43576071 Medicago truncatula
Medtr8g103550 0.5kb downstream 0.5kb downstream 2802   true chr8: 43572770-43575571 Medicago truncatula
Medtr8g103550 0.5kb downstream 0.5kb downstream 500   false chr8: 43572770-43573269 Medicago truncatula
Medtr8g103550 1.0kb upstream 1.0kb upstream 3302   true chr8: 43573270-43576571 Medicago truncatula
Medtr8g103550 1.0kb upstream 1.0kb upstream 1000   false chr8: 43575572-43576571 Medicago truncatula
Medtr8g103550 1.0kb downstream 1.0kb downstream 3302   true chr8: 43572270-43575571 Medicago truncatula
Medtr8g103550 1.0kb downstream 1.0kb downstream 1000   false chr8: 43572270-43573269 Medicago truncatula
Medtr8g103550 2.0kb upstream 2.0kb upstream 4302   true chr8: 43573270-43577571 Medicago truncatula
Medtr8g103550 2.0kb upstream 2.0kb upstream 2000   false chr8: 43575572-43577571 Medicago truncatula
Medtr8g103550 2.0kb downstream 2.0kb downstream 4302   true chr8: 43571270-43575571 Medicago truncatula
Medtr8g103550 2.0kb downstream 2.0kb downstream 2000   false chr8: 43571270-43573269 Medicago truncatula
Medtr8g103550 5.0kb upstream 5.0kb upstream 7302   true chr8: 43573270-43580571 Medicago truncatula
Medtr8g103550 5.0kb upstream 5.0kb upstream 5000   false chr8: 43575572-43580571 Medicago truncatula
Medtr8g103550 5.0kb downstream 5.0kb downstream 7302   true chr8: 43568270-43575571 Medicago truncatula
Medtr8g103550 5.0kb downstream 5.0kb downstream 5000   false chr8: 43568270-43573269 Medicago truncatula
Medtr8g103550 10.0kb upstream 10.0kb upstream 12302   true chr8: 43573270-43585571 Medicago truncatula
Medtr8g103550 10.0kb upstream 10.0kb upstream 10000   false chr8: 43575572-43585571 Medicago truncatula
Medtr8g103550 10.0kb downstream 10.0kb downstream 12302   true chr8: 43563270-43575571 Medicago truncatula
Medtr8g103550 10.0kb downstream 10.0kb downstream 10000   false chr8: 43563270-43573269 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307463 5265 Fabidae View MSA
124070426 5270 Rosid View MSA
123753240 5271 Pentapetalae View MSA
122795840 5272 Eudicot View MSA
122049622 5273 Angiosperm View MSA
121344376 5274 Embryophyte View MSA
123424016 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.061     Low Low
cufflinks 0.467        
cufflinks 0.46        
cufflinks 0.176        
cufflinks 0.578        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.197        
cufflinks 0.541        
cufflinks 0.108       Low

0 Strain