Gene : Medtr8g104540 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22573:SF47 - PHOSPHOGLUCOMUTASE, CYTOPLASMIC 1-RELATED Description:  cytoplasmic phosphoglucomutase
Genomic Order:  5586 Name:  ? Medtr8g104540
Secondary Identifier:  ? PAC:31069538
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula GLUCOSE1PMETAB-PWY Medicago truncatula pathologic  
Mtruncatula GLYCOGENSYNTH-PWY Medicago truncatula pathologic  
Mtruncatula PWY-3801 Medicago truncatula pathologic  
Mtruncatula PWY-5941 Medicago truncatula pathologic  
Mtruncatula PWY-622 Medicago truncatula pathologic  
Mtruncatula PWY66-422 Medicago truncatula pathologic  
Mtruncatula PWY-7238 Medicago truncatula pathologic  
Mtruncatula PWY-7343 Medicago truncatula pathologic  
Mtruncatula SUCSYN-PWY Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g104540 0.5kb upstream 0.5kb upstream 8907   true chr8: 44041351-44050257 Medicago truncatula
Medtr8g104540 0.5kb upstream 0.5kb upstream 500   false chr8: 44041351-44041850 Medicago truncatula
Medtr8g104540 0.5kb downstream 0.5kb downstream 8907   true chr8: 44041851-44050757 Medicago truncatula
Medtr8g104540 0.5kb downstream 0.5kb downstream 500   false chr8: 44050258-44050757 Medicago truncatula
Medtr8g104540 1.0kb upstream 1.0kb upstream 9407   true chr8: 44040851-44050257 Medicago truncatula
Medtr8g104540 1.0kb upstream 1.0kb upstream 1000   false chr8: 44040851-44041850 Medicago truncatula
Medtr8g104540 1.0kb downstream 1.0kb downstream 9407   true chr8: 44041851-44051257 Medicago truncatula
Medtr8g104540 1.0kb downstream 1.0kb downstream 1000   false chr8: 44050258-44051257 Medicago truncatula
Medtr8g104540 2.0kb upstream 2.0kb upstream 10407   true chr8: 44039851-44050257 Medicago truncatula
Medtr8g104540 2.0kb upstream 2.0kb upstream 2000   false chr8: 44039851-44041850 Medicago truncatula
Medtr8g104540 2.0kb downstream 2.0kb downstream 10407   true chr8: 44041851-44052257 Medicago truncatula
Medtr8g104540 2.0kb downstream 2.0kb downstream 2000   false chr8: 44050258-44052257 Medicago truncatula
Medtr8g104540 5.0kb upstream 5.0kb upstream 13407   true chr8: 44036851-44050257 Medicago truncatula
Medtr8g104540 5.0kb upstream 5.0kb upstream 5000   false chr8: 44036851-44041850 Medicago truncatula
Medtr8g104540 5.0kb downstream 5.0kb downstream 13407   true chr8: 44041851-44055257 Medicago truncatula
Medtr8g104540 5.0kb downstream 5.0kb downstream 5000   false chr8: 44050258-44055257 Medicago truncatula
Medtr8g104540 10.0kb upstream 10.0kb upstream 18407   true chr8: 44031851-44050257 Medicago truncatula
Medtr8g104540 10.0kb upstream 10.0kb upstream 10000   false chr8: 44031851-44041850 Medicago truncatula
Medtr8g104540 10.0kb downstream 10.0kb downstream 18407   true chr8: 44041851-44060257 Medicago truncatula
Medtr8g104540 10.0kb downstream 10.0kb downstream 10000   false chr8: 44050258-44060257 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305025 5265 Fabidae View MSA
124065382 5270 Rosid View MSA
123740036 5271 Pentapetalae View MSA
122791577 5272 Eudicot View MSA
122046067 5273 Angiosperm View MSA
121346784 5274 Embryophyte View MSA
123426013 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.016     High High
cufflinks 3.656        
cufflinks 1.53        
cufflinks 1.559        
cufflinks 4.181        
cufflinks 0.643       Low
cufflinks 2.8        
cufflinks 1.921        
cufflinks 5.728        

0 Strain