Gene : Medtr8g104260 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23139//PTHR23139:SF66 - RNA-BINDING PROTEIN Description:  hydroxyproline-rich glycoprotein-like protein
Genomic Order:  5566 Name:  ? Medtr8g104260
Secondary Identifier:  ? PAC:31074104
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g104260 0.5kb upstream 0.5kb upstream 6173   true chr8: 43900142-43906314 Medicago truncatula
Medtr8g104260 0.5kb upstream 0.5kb upstream 500   false chr8: 43905815-43906314 Medicago truncatula
Medtr8g104260 0.5kb downstream 0.5kb downstream 6173   true chr8: 43899642-43905814 Medicago truncatula
Medtr8g104260 0.5kb downstream 0.5kb downstream 500   false chr8: 43899642-43900141 Medicago truncatula
Medtr8g104260 1.0kb upstream 1.0kb upstream 6673   true chr8: 43900142-43906814 Medicago truncatula
Medtr8g104260 1.0kb upstream 1.0kb upstream 1000   false chr8: 43905815-43906814 Medicago truncatula
Medtr8g104260 1.0kb downstream 1.0kb downstream 6673   true chr8: 43899142-43905814 Medicago truncatula
Medtr8g104260 1.0kb downstream 1.0kb downstream 1000   false chr8: 43899142-43900141 Medicago truncatula
Medtr8g104260 2.0kb upstream 2.0kb upstream 7673   true chr8: 43900142-43907814 Medicago truncatula
Medtr8g104260 2.0kb upstream 2.0kb upstream 2000   false chr8: 43905815-43907814 Medicago truncatula
Medtr8g104260 2.0kb downstream 2.0kb downstream 7673   true chr8: 43898142-43905814 Medicago truncatula
Medtr8g104260 2.0kb downstream 2.0kb downstream 2000   false chr8: 43898142-43900141 Medicago truncatula
Medtr8g104260 5.0kb upstream 5.0kb upstream 10673   true chr8: 43900142-43910814 Medicago truncatula
Medtr8g104260 5.0kb upstream 5.0kb upstream 5000   false chr8: 43905815-43910814 Medicago truncatula
Medtr8g104260 5.0kb downstream 5.0kb downstream 10673   true chr8: 43895142-43905814 Medicago truncatula
Medtr8g104260 5.0kb downstream 5.0kb downstream 5000   false chr8: 43895142-43900141 Medicago truncatula
Medtr8g104260 10.0kb upstream 10.0kb upstream 15673   true chr8: 43900142-43915814 Medicago truncatula
Medtr8g104260 10.0kb upstream 10.0kb upstream 10000   false chr8: 43905815-43915814 Medicago truncatula
Medtr8g104260 10.0kb downstream 10.0kb downstream 15673   true chr8: 43890142-43905814 Medicago truncatula
Medtr8g104260 10.0kb downstream 10.0kb downstream 10000   false chr8: 43890142-43900141 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304981 5265 Fabidae View MSA
124068050 5270 Rosid View MSA
123743802 5271 Pentapetalae View MSA
122790530 5272 Eudicot View MSA
122047712 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310781 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.265        
cufflinks 4.107        
cufflinks 4.082        
cufflinks 6.379       High
cufflinks 4.098        
cufflinks 3.329       Low
cufflinks 4.25        
cufflinks 4.425        
cufflinks 4.779        

0 Strain