Gene : Medtr8g105630 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11592:SF33 - GLUTATHIONE PEROXIDASE 2-RELATED Description:  phospholipid hydroperoxide glutathione peroxidase
Genomic Order:  5645 Name:  ? Medtr8g105630
Secondary Identifier:  ? PAC:31073439
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-4081 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g105630 0.5kb upstream 0.5kb upstream 2947   true chr8: 44554960-44557906 Medicago truncatula
Medtr8g105630 0.5kb upstream 0.5kb upstream 500   false chr8: 44557407-44557906 Medicago truncatula
Medtr8g105630 0.5kb downstream 0.5kb downstream 2947   true chr8: 44554460-44557406 Medicago truncatula
Medtr8g105630 0.5kb downstream 0.5kb downstream 500   false chr8: 44554460-44554959 Medicago truncatula
Medtr8g105630 1.0kb upstream 1.0kb upstream 3447   true chr8: 44554960-44558406 Medicago truncatula
Medtr8g105630 1.0kb upstream 1.0kb upstream 1000   false chr8: 44557407-44558406 Medicago truncatula
Medtr8g105630 1.0kb downstream 1.0kb downstream 3447   true chr8: 44553960-44557406 Medicago truncatula
Medtr8g105630 1.0kb downstream 1.0kb downstream 1000   false chr8: 44553960-44554959 Medicago truncatula
Medtr8g105630 2.0kb upstream 2.0kb upstream 4447   true chr8: 44554960-44559406 Medicago truncatula
Medtr8g105630 2.0kb upstream 2.0kb upstream 2000   false chr8: 44557407-44559406 Medicago truncatula
Medtr8g105630 2.0kb downstream 2.0kb downstream 4447   true chr8: 44552960-44557406 Medicago truncatula
Medtr8g105630 2.0kb downstream 2.0kb downstream 2000   false chr8: 44552960-44554959 Medicago truncatula
Medtr8g105630 5.0kb upstream 5.0kb upstream 7447   true chr8: 44554960-44562406 Medicago truncatula
Medtr8g105630 5.0kb upstream 5.0kb upstream 5000   false chr8: 44557407-44562406 Medicago truncatula
Medtr8g105630 5.0kb downstream 5.0kb downstream 7447   true chr8: 44549960-44557406 Medicago truncatula
Medtr8g105630 5.0kb downstream 5.0kb downstream 5000   false chr8: 44549960-44554959 Medicago truncatula
Medtr8g105630 10.0kb upstream 10.0kb upstream 12447   true chr8: 44554960-44567406 Medicago truncatula
Medtr8g105630 10.0kb upstream 10.0kb upstream 10000   false chr8: 44557407-44567406 Medicago truncatula
Medtr8g105630 10.0kb downstream 10.0kb downstream 12447   true chr8: 44544960-44557406 Medicago truncatula
Medtr8g105630 10.0kb downstream 10.0kb downstream 10000   false chr8: 44544960-44554959 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300994 5265 Fabidae View MSA
124060403 5270 Rosid View MSA
123752336 5271 Pentapetalae View MSA
122792727 5272 Eudicot View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.636     High  
cufflinks 32.658     High  
cufflinks 25.426     High  
cufflinks 78.525     High High
cufflinks 22.856     High  
cufflinks 53.658     High  
cufflinks 109.343     High High
cufflinks 22.078     High Low
cufflinks 46.745     High  

0 Strain