Gene : Medtr8g105290 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10350 - NUCLEAR PORE COMPLEX PROTEIN NUP155 Description:  nuclear pore complex Nup155-like protein
Genomic Order:  5630 Name:  ? Medtr8g105290
Secondary Identifier:  ? PAC:31076563
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g105290 0.5kb upstream 0.5kb upstream 11048   true chr8: 44416638-44427685 Medicago truncatula
Medtr8g105290 0.5kb upstream 0.5kb upstream 500   false chr8: 44427186-44427685 Medicago truncatula
Medtr8g105290 0.5kb downstream 0.5kb downstream 11048   true chr8: 44416138-44427185 Medicago truncatula
Medtr8g105290 0.5kb downstream 0.5kb downstream 500   false chr8: 44416138-44416637 Medicago truncatula
Medtr8g105290 1.0kb upstream 1.0kb upstream 11548   true chr8: 44416638-44428185 Medicago truncatula
Medtr8g105290 1.0kb upstream 1.0kb upstream 1000   false chr8: 44427186-44428185 Medicago truncatula
Medtr8g105290 1.0kb downstream 1.0kb downstream 11548   true chr8: 44415638-44427185 Medicago truncatula
Medtr8g105290 1.0kb downstream 1.0kb downstream 1000   false chr8: 44415638-44416637 Medicago truncatula
Medtr8g105290 2.0kb upstream 2.0kb upstream 12548   true chr8: 44416638-44429185 Medicago truncatula
Medtr8g105290 2.0kb upstream 2.0kb upstream 2000   false chr8: 44427186-44429185 Medicago truncatula
Medtr8g105290 2.0kb downstream 2.0kb downstream 12548   true chr8: 44414638-44427185 Medicago truncatula
Medtr8g105290 2.0kb downstream 2.0kb downstream 2000   false chr8: 44414638-44416637 Medicago truncatula
Medtr8g105290 5.0kb upstream 5.0kb upstream 15548   true chr8: 44416638-44432185 Medicago truncatula
Medtr8g105290 5.0kb upstream 5.0kb upstream 5000   false chr8: 44427186-44432185 Medicago truncatula
Medtr8g105290 5.0kb downstream 5.0kb downstream 15548   true chr8: 44411638-44427185 Medicago truncatula
Medtr8g105290 5.0kb downstream 5.0kb downstream 5000   false chr8: 44411638-44416637 Medicago truncatula
Medtr8g105290 10.0kb upstream 10.0kb upstream 20548   true chr8: 44416638-44437185 Medicago truncatula
Medtr8g105290 10.0kb upstream 10.0kb upstream 10000   false chr8: 44427186-44437185 Medicago truncatula
Medtr8g105290 10.0kb downstream 10.0kb downstream 20548   true chr8: 44406638-44427185 Medicago truncatula
Medtr8g105290 10.0kb downstream 10.0kb downstream 10000   false chr8: 44406638-44416637 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307236 5265 Fabidae View MSA
124061969 5270 Rosid View MSA
123736896 5271 Pentapetalae View MSA
122792710 5272 Eudicot View MSA
122046521 5273 Angiosperm View MSA
121344629 5274 Embryophyte View MSA
123428808 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.115        
cufflinks 1.984        
cufflinks 2.396        
cufflinks 1.016       Low
cufflinks 3.677       High
cufflinks 0.748       Low
cufflinks 1.578        
cufflinks 2.079        
cufflinks 2.953        

0 Strain