Gene : Medtr8g104930 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23153:SF39 - CDC48-INTERACTING UBX-DOMAIN PROTEIN Description:  plant UBX domain protein
Genomic Order:  5605 Name:  ? Medtr8g104930
Secondary Identifier:  ? PAC:31074818
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g104930 0.5kb upstream 0.5kb upstream 3779   true chr8: 44235496-44239274 Medicago truncatula
Medtr8g104930 0.5kb upstream 0.5kb upstream 500   false chr8: 44238775-44239274 Medicago truncatula
Medtr8g104930 0.5kb downstream 0.5kb downstream 3779   true chr8: 44234996-44238774 Medicago truncatula
Medtr8g104930 0.5kb downstream 0.5kb downstream 500   false chr8: 44234996-44235495 Medicago truncatula
Medtr8g104930 1.0kb upstream 1.0kb upstream 4279   true chr8: 44235496-44239774 Medicago truncatula
Medtr8g104930 1.0kb upstream 1.0kb upstream 1000   false chr8: 44238775-44239774 Medicago truncatula
Medtr8g104930 1.0kb downstream 1.0kb downstream 4279   true chr8: 44234496-44238774 Medicago truncatula
Medtr8g104930 1.0kb downstream 1.0kb downstream 1000   false chr8: 44234496-44235495 Medicago truncatula
Medtr8g104930 2.0kb upstream 2.0kb upstream 5279   true chr8: 44235496-44240774 Medicago truncatula
Medtr8g104930 2.0kb upstream 2.0kb upstream 2000   false chr8: 44238775-44240774 Medicago truncatula
Medtr8g104930 2.0kb downstream 2.0kb downstream 5279   true chr8: 44233496-44238774 Medicago truncatula
Medtr8g104930 2.0kb downstream 2.0kb downstream 2000   false chr8: 44233496-44235495 Medicago truncatula
Medtr8g104930 5.0kb upstream 5.0kb upstream 8279   true chr8: 44235496-44243774 Medicago truncatula
Medtr8g104930 5.0kb upstream 5.0kb upstream 5000   false chr8: 44238775-44243774 Medicago truncatula
Medtr8g104930 5.0kb downstream 5.0kb downstream 8279   true chr8: 44230496-44238774 Medicago truncatula
Medtr8g104930 5.0kb downstream 5.0kb downstream 5000   false chr8: 44230496-44235495 Medicago truncatula
Medtr8g104930 10.0kb upstream 10.0kb upstream 13279   true chr8: 44235496-44248774 Medicago truncatula
Medtr8g104930 10.0kb upstream 10.0kb upstream 10000   false chr8: 44238775-44248774 Medicago truncatula
Medtr8g104930 10.0kb downstream 10.0kb downstream 13279   true chr8: 44225496-44238774 Medicago truncatula
Medtr8g104930 10.0kb downstream 10.0kb downstream 10000   false chr8: 44225496-44235495 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308497 5265 Fabidae View MSA
124062974 5270 Rosid View MSA
123738229 5271 Pentapetalae View MSA
122787429 5272 Eudicot View MSA
122047714 5273 Angiosperm View MSA
121346643 5274 Embryophyte View MSA
123428120 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.565        
cufflinks 6.021       Low
cufflinks 7.78        
cufflinks 9.046     High  
cufflinks 7.266        
cufflinks 10.112        
cufflinks 15.432     High High
cufflinks 5.446       Low
cufflinks 13.583     High High

0 Strain