Gene : Medtr8g105830 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR15970:SF2 - ELL-ASSOCIATED FACTOR EAF Description:  RNA polymerase II transcription elongation factor, putative
Genomic Order:  5655 Name:  ? Medtr8g105830
Secondary Identifier:  ? PAC:31070983
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g105830 0.5kb upstream 0.5kb upstream 4556   true chr8: 44650006-44654561 Medicago truncatula
Medtr8g105830 0.5kb upstream 0.5kb upstream 500   false chr8: 44654062-44654561 Medicago truncatula
Medtr8g105830 0.5kb downstream 0.5kb downstream 4556   true chr8: 44649506-44654061 Medicago truncatula
Medtr8g105830 0.5kb downstream 0.5kb downstream 500   false chr8: 44649506-44650005 Medicago truncatula
Medtr8g105830 1.0kb upstream 1.0kb upstream 5056   true chr8: 44650006-44655061 Medicago truncatula
Medtr8g105830 1.0kb upstream 1.0kb upstream 1000   false chr8: 44654062-44655061 Medicago truncatula
Medtr8g105830 1.0kb downstream 1.0kb downstream 5056   true chr8: 44649006-44654061 Medicago truncatula
Medtr8g105830 1.0kb downstream 1.0kb downstream 1000   false chr8: 44649006-44650005 Medicago truncatula
Medtr8g105830 2.0kb upstream 2.0kb upstream 6056   true chr8: 44650006-44656061 Medicago truncatula
Medtr8g105830 2.0kb upstream 2.0kb upstream 2000   false chr8: 44654062-44656061 Medicago truncatula
Medtr8g105830 2.0kb downstream 2.0kb downstream 6056   true chr8: 44648006-44654061 Medicago truncatula
Medtr8g105830 2.0kb downstream 2.0kb downstream 2000   false chr8: 44648006-44650005 Medicago truncatula
Medtr8g105830 5.0kb upstream 5.0kb upstream 9056   true chr8: 44650006-44659061 Medicago truncatula
Medtr8g105830 5.0kb upstream 5.0kb upstream 5000   false chr8: 44654062-44659061 Medicago truncatula
Medtr8g105830 5.0kb downstream 5.0kb downstream 9056   true chr8: 44645006-44654061 Medicago truncatula
Medtr8g105830 5.0kb downstream 5.0kb downstream 5000   false chr8: 44645006-44650005 Medicago truncatula
Medtr8g105830 10.0kb upstream 10.0kb upstream 14056   true chr8: 44650006-44664061 Medicago truncatula
Medtr8g105830 10.0kb upstream 10.0kb upstream 10000   false chr8: 44654062-44664061 Medicago truncatula
Medtr8g105830 10.0kb downstream 10.0kb downstream 14056   true chr8: 44640006-44654061 Medicago truncatula
Medtr8g105830 10.0kb downstream 10.0kb downstream 10000   false chr8: 44640006-44650005 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305893 5265 Fabidae View MSA
124060442 5270 Rosid View MSA
123736419 5271 Pentapetalae View MSA
122791922 5272 Eudicot View MSA
122044960 5273 Angiosperm View MSA
121347261 5274 Embryophyte View MSA
123428623 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.319        
cufflinks 6.542        
cufflinks 10.47     High  
cufflinks 13.215     High High
cufflinks 6.36        
cufflinks 4.055       Low
cufflinks 9.464        
cufflinks 7.218        
cufflinks 8.108        

0 Strain