Gene : Medtr8g106470 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF10280 - Mediator complex protein (Med11) Description:  mediator of RNA polymerase II transcription subunit 11
Genomic Order:  5691 Name:  ? Medtr8g106470
Secondary Identifier:  ? PAC:31071346
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g106470 0.5kb upstream 0.5kb upstream 4759   true chr8: 44929445-44934203 Medicago truncatula
Medtr8g106470 0.5kb upstream 0.5kb upstream 500   false chr8: 44933704-44934203 Medicago truncatula
Medtr8g106470 0.5kb downstream 0.5kb downstream 4759   true chr8: 44928945-44933703 Medicago truncatula
Medtr8g106470 0.5kb downstream 0.5kb downstream 500   false chr8: 44928945-44929444 Medicago truncatula
Medtr8g106470 1.0kb upstream 1.0kb upstream 5259   true chr8: 44929445-44934703 Medicago truncatula
Medtr8g106470 1.0kb upstream 1.0kb upstream 1000   false chr8: 44933704-44934703 Medicago truncatula
Medtr8g106470 1.0kb downstream 1.0kb downstream 5259   true chr8: 44928445-44933703 Medicago truncatula
Medtr8g106470 1.0kb downstream 1.0kb downstream 1000   false chr8: 44928445-44929444 Medicago truncatula
Medtr8g106470 2.0kb upstream 2.0kb upstream 6259   true chr8: 44929445-44935703 Medicago truncatula
Medtr8g106470 2.0kb upstream 2.0kb upstream 2000   false chr8: 44933704-44935703 Medicago truncatula
Medtr8g106470 2.0kb downstream 2.0kb downstream 6259   true chr8: 44927445-44933703 Medicago truncatula
Medtr8g106470 2.0kb downstream 2.0kb downstream 2000   false chr8: 44927445-44929444 Medicago truncatula
Medtr8g106470 5.0kb upstream 5.0kb upstream 9259   true chr8: 44929445-44938703 Medicago truncatula
Medtr8g106470 5.0kb upstream 5.0kb upstream 5000   false chr8: 44933704-44938703 Medicago truncatula
Medtr8g106470 5.0kb downstream 5.0kb downstream 9259   true chr8: 44924445-44933703 Medicago truncatula
Medtr8g106470 5.0kb downstream 5.0kb downstream 5000   false chr8: 44924445-44929444 Medicago truncatula
Medtr8g106470 10.0kb upstream 10.0kb upstream 14259   true chr8: 44929445-44943703 Medicago truncatula
Medtr8g106470 10.0kb upstream 10.0kb upstream 10000   false chr8: 44933704-44943703 Medicago truncatula
Medtr8g106470 10.0kb downstream 10.0kb downstream 14259   true chr8: 44919445-44933703 Medicago truncatula
Medtr8g106470 10.0kb downstream 10.0kb downstream 10000   false chr8: 44919445-44929444 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300824 5265 Fabidae View MSA
124071182 5270 Rosid View MSA
123753036 5271 Pentapetalae View MSA
122786862 5272 Eudicot View MSA
122043453 5273 Angiosperm View MSA
121349058 5274 Embryophyte View MSA
123381143 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.463        
cufflinks 0.494        
cufflinks 0.466        
cufflinks 0.468        
cufflinks 0.529       High
cufflinks 0.388        
cufflinks 0.466        
cufflinks 0.436        
cufflinks 0.276       Low

0 Strain