Gene : Medtr8g106240 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22937:SF18 - F6A14.12 PROTEIN-RELATED Description:  C3HC4-type RING zinc finger protein
Genomic Order:  5683 Name:  ? Medtr8g106240
Secondary Identifier:  ? PAC:31070513
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g106240 0.5kb upstream 0.5kb upstream 4069   true chr8: 44874238-44878306 Medicago truncatula
Medtr8g106240 0.5kb upstream 0.5kb upstream 500   false chr8: 44874238-44874737 Medicago truncatula
Medtr8g106240 0.5kb downstream 0.5kb downstream 4069   true chr8: 44874738-44878806 Medicago truncatula
Medtr8g106240 0.5kb downstream 0.5kb downstream 500   false chr8: 44878307-44878806 Medicago truncatula
Medtr8g106240 1.0kb upstream 1.0kb upstream 4569   true chr8: 44873738-44878306 Medicago truncatula
Medtr8g106240 1.0kb upstream 1.0kb upstream 1000   false chr8: 44873738-44874737 Medicago truncatula
Medtr8g106240 1.0kb downstream 1.0kb downstream 4569   true chr8: 44874738-44879306 Medicago truncatula
Medtr8g106240 1.0kb downstream 1.0kb downstream 1000   false chr8: 44878307-44879306 Medicago truncatula
Medtr8g106240 2.0kb upstream 2.0kb upstream 5569   true chr8: 44872738-44878306 Medicago truncatula
Medtr8g106240 2.0kb upstream 2.0kb upstream 2000   false chr8: 44872738-44874737 Medicago truncatula
Medtr8g106240 2.0kb downstream 2.0kb downstream 5569   true chr8: 44874738-44880306 Medicago truncatula
Medtr8g106240 2.0kb downstream 2.0kb downstream 2000   false chr8: 44878307-44880306 Medicago truncatula
Medtr8g106240 5.0kb upstream 5.0kb upstream 8569   true chr8: 44869738-44878306 Medicago truncatula
Medtr8g106240 5.0kb upstream 5.0kb upstream 5000   false chr8: 44869738-44874737 Medicago truncatula
Medtr8g106240 5.0kb downstream 5.0kb downstream 8569   true chr8: 44874738-44883306 Medicago truncatula
Medtr8g106240 5.0kb downstream 5.0kb downstream 5000   false chr8: 44878307-44883306 Medicago truncatula
Medtr8g106240 10.0kb upstream 10.0kb upstream 13569   true chr8: 44864738-44878306 Medicago truncatula
Medtr8g106240 10.0kb upstream 10.0kb upstream 10000   false chr8: 44864738-44874737 Medicago truncatula
Medtr8g106240 10.0kb downstream 10.0kb downstream 13569   true chr8: 44874738-44888306 Medicago truncatula
Medtr8g106240 10.0kb downstream 10.0kb downstream 10000   false chr8: 44878307-44888306 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026372 5273 Angiosperm View MSA
122311099 5265 Fabidae View MSA
124065155 5270 Rosid View MSA
123747063 5271 Pentapetalae View MSA
122788890 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121296298 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.835       High
cufflinks 2.605        
cufflinks 1.684        
cufflinks 0.542        
cufflinks 2.748        
cufflinks 0.182       Low
cufflinks 1.035        
cufflinks 1.584        
cufflinks 1.196        

0 Strain