Gene : Medtr8g107400 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11102:SF84 - HCP-like superfamily protein-related Description:  Sel1 repeat protein
Genomic Order:  5766 Name:  ? Medtr8g107400
Secondary Identifier:  ? PAC:31075201
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g107400 0.5kb upstream 0.5kb upstream 7209   true chr8: 45386715-45393923 Medicago truncatula
Medtr8g107400 0.5kb upstream 0.5kb upstream 500   false chr8: 45393424-45393923 Medicago truncatula
Medtr8g107400 0.5kb downstream 0.5kb downstream 7209   true chr8: 45386215-45393423 Medicago truncatula
Medtr8g107400 0.5kb downstream 0.5kb downstream 500   false chr8: 45386215-45386714 Medicago truncatula
Medtr8g107400 1.0kb upstream 1.0kb upstream 7709   true chr8: 45386715-45394423 Medicago truncatula
Medtr8g107400 1.0kb upstream 1.0kb upstream 1000   false chr8: 45393424-45394423 Medicago truncatula
Medtr8g107400 1.0kb downstream 1.0kb downstream 7709   true chr8: 45385715-45393423 Medicago truncatula
Medtr8g107400 1.0kb downstream 1.0kb downstream 1000   false chr8: 45385715-45386714 Medicago truncatula
Medtr8g107400 2.0kb upstream 2.0kb upstream 8709   true chr8: 45386715-45395423 Medicago truncatula
Medtr8g107400 2.0kb upstream 2.0kb upstream 2000   false chr8: 45393424-45395423 Medicago truncatula
Medtr8g107400 2.0kb downstream 2.0kb downstream 8709   true chr8: 45384715-45393423 Medicago truncatula
Medtr8g107400 2.0kb downstream 2.0kb downstream 2000   false chr8: 45384715-45386714 Medicago truncatula
Medtr8g107400 5.0kb upstream 5.0kb upstream 11709   true chr8: 45386715-45398423 Medicago truncatula
Medtr8g107400 5.0kb upstream 5.0kb upstream 5000   false chr8: 45393424-45398423 Medicago truncatula
Medtr8g107400 5.0kb downstream 5.0kb downstream 11709   true chr8: 45381715-45393423 Medicago truncatula
Medtr8g107400 5.0kb downstream 5.0kb downstream 5000   false chr8: 45381715-45386714 Medicago truncatula
Medtr8g107400 10.0kb upstream 10.0kb upstream 16709   true chr8: 45386715-45403423 Medicago truncatula
Medtr8g107400 10.0kb upstream 10.0kb upstream 10000   false chr8: 45393424-45403423 Medicago truncatula
Medtr8g107400 10.0kb downstream 10.0kb downstream 16709   true chr8: 45376715-45393423 Medicago truncatula
Medtr8g107400 10.0kb downstream 10.0kb downstream 10000   false chr8: 45376715-45386714 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299541 5265 Fabidae View MSA
124065958 5270 Rosid View MSA
123743984 5271 Pentapetalae View MSA
122786956 5272 Eudicot View MSA
122044163 5273 Angiosperm View MSA
123428907 5275 Viridiplantae View MSA
121346808 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.564        
cufflinks 6.546        
cufflinks 6.906        
cufflinks 14.458     High High
cufflinks 6.141        
cufflinks 4.785       Low
cufflinks 7.307        
cufflinks 5.537        
cufflinks 9.857        

0 Strain