Gene : Medtr8g107440 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR15454 - NISCHARIN RELATED Description:  outer arm dynein light chain 1
Genomic Order:  5770 Name:  ? Medtr8g107440
Secondary Identifier:  ? PAC:31070572
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g107440 0.5kb upstream 0.5kb upstream 10954   true chr8: 45413991-45424944 Medicago truncatula
Medtr8g107440 0.5kb upstream 0.5kb upstream 500   false chr8: 45413991-45414490 Medicago truncatula
Medtr8g107440 0.5kb downstream 0.5kb downstream 10954   true chr8: 45414491-45425444 Medicago truncatula
Medtr8g107440 0.5kb downstream 0.5kb downstream 500   false chr8: 45424945-45425444 Medicago truncatula
Medtr8g107440 1.0kb upstream 1.0kb upstream 11454   true chr8: 45413491-45424944 Medicago truncatula
Medtr8g107440 1.0kb upstream 1.0kb upstream 1000   false chr8: 45413491-45414490 Medicago truncatula
Medtr8g107440 1.0kb downstream 1.0kb downstream 11454   true chr8: 45414491-45425944 Medicago truncatula
Medtr8g107440 1.0kb downstream 1.0kb downstream 1000   false chr8: 45424945-45425944 Medicago truncatula
Medtr8g107440 2.0kb upstream 2.0kb upstream 12454   true chr8: 45412491-45424944 Medicago truncatula
Medtr8g107440 2.0kb upstream 2.0kb upstream 2000   false chr8: 45412491-45414490 Medicago truncatula
Medtr8g107440 2.0kb downstream 2.0kb downstream 12454   true chr8: 45414491-45426944 Medicago truncatula
Medtr8g107440 2.0kb downstream 2.0kb downstream 2000   false chr8: 45424945-45426944 Medicago truncatula
Medtr8g107440 5.0kb upstream 5.0kb upstream 15454   true chr8: 45409491-45424944 Medicago truncatula
Medtr8g107440 5.0kb upstream 5.0kb upstream 5000   false chr8: 45409491-45414490 Medicago truncatula
Medtr8g107440 5.0kb downstream 5.0kb downstream 15454   true chr8: 45414491-45429944 Medicago truncatula
Medtr8g107440 5.0kb downstream 5.0kb downstream 5000   false chr8: 45424945-45429944 Medicago truncatula
Medtr8g107440 10.0kb upstream 10.0kb upstream 20454   true chr8: 45404491-45424944 Medicago truncatula
Medtr8g107440 10.0kb upstream 10.0kb upstream 10000   false chr8: 45404491-45414490 Medicago truncatula
Medtr8g107440 10.0kb downstream 10.0kb downstream 20454   true chr8: 45414491-45434944 Medicago truncatula
Medtr8g107440 10.0kb downstream 10.0kb downstream 10000   false chr8: 45424945-45434944 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304834 5265 Fabidae View MSA
124068979 5270 Rosid View MSA
123746713 5271 Pentapetalae View MSA
122789922 5272 Eudicot View MSA
122043032 5273 Angiosperm View MSA
121348804 5274 Embryophyte View MSA
123427587 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.124        
cufflinks 1.483        
cufflinks 1.711       High
cufflinks 0.559       Low
cufflinks 1.601        
cufflinks 0.739       Low
cufflinks 1.166        
cufflinks 1.258        
cufflinks 1.047        

0 Strain