Gene : Medtr8g107430 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF11460 - Protein of unknown function (DUF3007) (DUF3007) Description:  transmembrane protein, putative
Genomic Order:  5769 Name:  ? Medtr8g107430
Secondary Identifier:  ? PAC:31073148
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g107430 0.5kb upstream 0.5kb upstream 2516   true chr8: 45410613-45413128 Medicago truncatula
Medtr8g107430 0.5kb upstream 0.5kb upstream 500   false chr8: 45410613-45411112 Medicago truncatula
Medtr8g107430 0.5kb downstream 0.5kb downstream 2516   true chr8: 45411113-45413628 Medicago truncatula
Medtr8g107430 0.5kb downstream 0.5kb downstream 500   false chr8: 45413129-45413628 Medicago truncatula
Medtr8g107430 1.0kb upstream 1.0kb upstream 3016   true chr8: 45410113-45413128 Medicago truncatula
Medtr8g107430 1.0kb upstream 1.0kb upstream 1000   false chr8: 45410113-45411112 Medicago truncatula
Medtr8g107430 1.0kb downstream 1.0kb downstream 3016   true chr8: 45411113-45414128 Medicago truncatula
Medtr8g107430 1.0kb downstream 1.0kb downstream 1000   false chr8: 45413129-45414128 Medicago truncatula
Medtr8g107430 2.0kb upstream 2.0kb upstream 4016   true chr8: 45409113-45413128 Medicago truncatula
Medtr8g107430 2.0kb upstream 2.0kb upstream 2000   false chr8: 45409113-45411112 Medicago truncatula
Medtr8g107430 2.0kb downstream 2.0kb downstream 4016   true chr8: 45411113-45415128 Medicago truncatula
Medtr8g107430 2.0kb downstream 2.0kb downstream 2000   false chr8: 45413129-45415128 Medicago truncatula
Medtr8g107430 5.0kb upstream 5.0kb upstream 7016   true chr8: 45406113-45413128 Medicago truncatula
Medtr8g107430 5.0kb upstream 5.0kb upstream 5000   false chr8: 45406113-45411112 Medicago truncatula
Medtr8g107430 5.0kb downstream 5.0kb downstream 7016   true chr8: 45411113-45418128 Medicago truncatula
Medtr8g107430 5.0kb downstream 5.0kb downstream 5000   false chr8: 45413129-45418128 Medicago truncatula
Medtr8g107430 10.0kb upstream 10.0kb upstream 12016   true chr8: 45401113-45413128 Medicago truncatula
Medtr8g107430 10.0kb upstream 10.0kb upstream 10000   false chr8: 45401113-45411112 Medicago truncatula
Medtr8g107430 10.0kb downstream 10.0kb downstream 12016   true chr8: 45411113-45423128 Medicago truncatula
Medtr8g107430 10.0kb downstream 10.0kb downstream 10000   false chr8: 45413129-45423128 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310801 5265 Fabidae View MSA
124060473 5270 Rosid View MSA
123747661 5271 Pentapetalae View MSA
122795403 5272 Eudicot View MSA
122047779 5273 Angiosperm View MSA
121344502 5274 Embryophyte View MSA
123428254 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.862        
cufflinks 42.506     High High
cufflinks 43.978     High High
cufflinks 4.111        
cufflinks 40.787     High High
cufflinks 5.498        
cufflinks 4.114        
cufflinks 37.481     High  
cufflinks 3.96       Low

0 Strain