Gene : Medtr8g107010 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10516:SF308 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-2, CHLOROPLASTIC-RELATED Description:  FKBP-type peptidyl-prolyl cis-trans isomerase
Genomic Order:  5736 Name:  ? Medtr8g107010
Secondary Identifier:  ? PAC:31073595
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g107010 0.5kb upstream 0.5kb upstream 1896   true chr8: 45205893-45207788 Medicago truncatula
Medtr8g107010 0.5kb upstream 0.5kb upstream 500   false chr8: 45205893-45206392 Medicago truncatula
Medtr8g107010 0.5kb downstream 0.5kb downstream 1896   true chr8: 45206393-45208288 Medicago truncatula
Medtr8g107010 0.5kb downstream 0.5kb downstream 500   false chr8: 45207789-45208288 Medicago truncatula
Medtr8g107010 1.0kb upstream 1.0kb upstream 2396   true chr8: 45205393-45207788 Medicago truncatula
Medtr8g107010 1.0kb upstream 1.0kb upstream 1000   false chr8: 45205393-45206392 Medicago truncatula
Medtr8g107010 1.0kb downstream 1.0kb downstream 2396   true chr8: 45206393-45208788 Medicago truncatula
Medtr8g107010 1.0kb downstream 1.0kb downstream 1000   false chr8: 45207789-45208788 Medicago truncatula
Medtr8g107010 2.0kb upstream 2.0kb upstream 3396   true chr8: 45204393-45207788 Medicago truncatula
Medtr8g107010 2.0kb upstream 2.0kb upstream 2000   false chr8: 45204393-45206392 Medicago truncatula
Medtr8g107010 2.0kb downstream 2.0kb downstream 3396   true chr8: 45206393-45209788 Medicago truncatula
Medtr8g107010 2.0kb downstream 2.0kb downstream 2000   false chr8: 45207789-45209788 Medicago truncatula
Medtr8g107010 5.0kb upstream 5.0kb upstream 6396   true chr8: 45201393-45207788 Medicago truncatula
Medtr8g107010 5.0kb upstream 5.0kb upstream 5000   false chr8: 45201393-45206392 Medicago truncatula
Medtr8g107010 5.0kb downstream 5.0kb downstream 6396   true chr8: 45206393-45212788 Medicago truncatula
Medtr8g107010 5.0kb downstream 5.0kb downstream 5000   false chr8: 45207789-45212788 Medicago truncatula
Medtr8g107010 10.0kb upstream 10.0kb upstream 11396   true chr8: 45196393-45207788 Medicago truncatula
Medtr8g107010 10.0kb upstream 10.0kb upstream 10000   false chr8: 45196393-45206392 Medicago truncatula
Medtr8g107010 10.0kb downstream 10.0kb downstream 11396   true chr8: 45206393-45217788 Medicago truncatula
Medtr8g107010 10.0kb downstream 10.0kb downstream 10000   false chr8: 45207789-45217788 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041293 5273 Angiosperm View MSA
122300132 5265 Fabidae View MSA
124068387 5270 Rosid View MSA
123740147 5271 Pentapetalae View MSA
122793412 5272 Eudicot View MSA
121344596 5274 Embryophyte View MSA
123424769 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.267       Low
cufflinks 147.598     High  
cufflinks 259.079     High High
cufflinks 14.217     High  
cufflinks 257.137     High High
cufflinks 10.52     High  
cufflinks 4.19        
cufflinks 193.868     High  
cufflinks 3.597        

0 Strain