Gene : Medtr8g106980 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11467//PTHR11467:SF33 - HISTONE H1/H5 Description:  linker histone H1 and h5 family protein
Genomic Order:  5733 Name:  ? Medtr8g106980
Secondary Identifier:  ? PAC:31069958
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g106980 0.5kb upstream 0.5kb upstream 3622   true chr8: 45185046-45188667 Medicago truncatula
Medtr8g106980 0.5kb upstream 0.5kb upstream 500   false chr8: 45185046-45185545 Medicago truncatula
Medtr8g106980 0.5kb downstream 0.5kb downstream 3622   true chr8: 45185546-45189167 Medicago truncatula
Medtr8g106980 0.5kb downstream 0.5kb downstream 500   false chr8: 45188668-45189167 Medicago truncatula
Medtr8g106980 1.0kb upstream 1.0kb upstream 4122   true chr8: 45184546-45188667 Medicago truncatula
Medtr8g106980 1.0kb upstream 1.0kb upstream 1000   false chr8: 45184546-45185545 Medicago truncatula
Medtr8g106980 1.0kb downstream 1.0kb downstream 4122   true chr8: 45185546-45189667 Medicago truncatula
Medtr8g106980 1.0kb downstream 1.0kb downstream 1000   false chr8: 45188668-45189667 Medicago truncatula
Medtr8g106980 2.0kb upstream 2.0kb upstream 5122   true chr8: 45183546-45188667 Medicago truncatula
Medtr8g106980 2.0kb upstream 2.0kb upstream 2000   false chr8: 45183546-45185545 Medicago truncatula
Medtr8g106980 2.0kb downstream 2.0kb downstream 5122   true chr8: 45185546-45190667 Medicago truncatula
Medtr8g106980 2.0kb downstream 2.0kb downstream 2000   false chr8: 45188668-45190667 Medicago truncatula
Medtr8g106980 5.0kb upstream 5.0kb upstream 8122   true chr8: 45180546-45188667 Medicago truncatula
Medtr8g106980 5.0kb upstream 5.0kb upstream 5000   false chr8: 45180546-45185545 Medicago truncatula
Medtr8g106980 5.0kb downstream 5.0kb downstream 8122   true chr8: 45185546-45193667 Medicago truncatula
Medtr8g106980 5.0kb downstream 5.0kb downstream 5000   false chr8: 45188668-45193667 Medicago truncatula
Medtr8g106980 10.0kb upstream 10.0kb upstream 13122   true chr8: 45175546-45188667 Medicago truncatula
Medtr8g106980 10.0kb upstream 10.0kb upstream 10000   false chr8: 45175546-45185545 Medicago truncatula
Medtr8g106980 10.0kb downstream 10.0kb downstream 13122   true chr8: 45185546-45198667 Medicago truncatula
Medtr8g106980 10.0kb downstream 10.0kb downstream 10000   false chr8: 45188668-45198667 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029847 5273 Angiosperm View MSA
122311965 5265 Fabidae View MSA
124072577 5270 Rosid View MSA
123747528 5271 Pentapetalae View MSA
122795088 5272 Eudicot View MSA
121350617 5274 Embryophyte View MSA
123428771 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.409       Low
cufflinks 6.994       High
cufflinks 5.704        
cufflinks 4.447        
cufflinks 6.642       High
cufflinks 2.551       Low
cufflinks 2.166       Low
cufflinks 5.197        
cufflinks 4.041        

0 Strain