Gene : Medtr8g432540 M. truncatula Mt4.0v1
Defline:  (1 of 15) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) Description:  homeobox leucine zipper protein
Genomic Order:  1640 Name:  ? Medtr8g432540
Secondary Identifier:  ? PAC:31071520
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g432540 0.5kb upstream 0.5kb upstream 7132   true chr8: 12321574-12328705 Medicago truncatula
Medtr8g432540 0.5kb upstream 0.5kb upstream 500   false chr8: 12328206-12328705 Medicago truncatula
Medtr8g432540 0.5kb downstream 0.5kb downstream 7132   true chr8: 12321074-12328205 Medicago truncatula
Medtr8g432540 0.5kb downstream 0.5kb downstream 500   false chr8: 12321074-12321573 Medicago truncatula
Medtr8g432540 1.0kb upstream 1.0kb upstream 7632   true chr8: 12321574-12329205 Medicago truncatula
Medtr8g432540 1.0kb upstream 1.0kb upstream 1000   false chr8: 12328206-12329205 Medicago truncatula
Medtr8g432540 1.0kb downstream 1.0kb downstream 7632   true chr8: 12320574-12328205 Medicago truncatula
Medtr8g432540 1.0kb downstream 1.0kb downstream 1000   false chr8: 12320574-12321573 Medicago truncatula
Medtr8g432540 2.0kb upstream 2.0kb upstream 8632   true chr8: 12321574-12330205 Medicago truncatula
Medtr8g432540 2.0kb upstream 2.0kb upstream 2000   false chr8: 12328206-12330205 Medicago truncatula
Medtr8g432540 2.0kb downstream 2.0kb downstream 8632   true chr8: 12319574-12328205 Medicago truncatula
Medtr8g432540 2.0kb downstream 2.0kb downstream 2000   false chr8: 12319574-12321573 Medicago truncatula
Medtr8g432540 5.0kb upstream 5.0kb upstream 11632   true chr8: 12321574-12333205 Medicago truncatula
Medtr8g432540 5.0kb upstream 5.0kb upstream 5000   false chr8: 12328206-12333205 Medicago truncatula
Medtr8g432540 5.0kb downstream 5.0kb downstream 11632   true chr8: 12316574-12328205 Medicago truncatula
Medtr8g432540 5.0kb downstream 5.0kb downstream 5000   false chr8: 12316574-12321573 Medicago truncatula
Medtr8g432540 10.0kb upstream 10.0kb upstream 16632   true chr8: 12321574-12338205 Medicago truncatula
Medtr8g432540 10.0kb upstream 10.0kb upstream 10000   false chr8: 12328206-12338205 Medicago truncatula
Medtr8g432540 10.0kb downstream 10.0kb downstream 16632   true chr8: 12311574-12328205 Medicago truncatula
Medtr8g432540 10.0kb downstream 10.0kb downstream 10000   false chr8: 12311574-12321573 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312921 5265 Fabidae View MSA
124063291 5270 Rosid View MSA
123740352 5271 Pentapetalae View MSA
122790073 5272 Eudicot View MSA
122048483 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.2       Low
cufflinks 38.551     High High
cufflinks 37.254     High High
cufflinks 0.234       Low
cufflinks 38.635     High High
cufflinks 0.58        
cufflinks 0.586        
cufflinks 36.028     High High
cufflinks 0.585        

0 Strain