Gene : Medtr8g107670 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10314:SF79 - DOF-TYPE TRANSCRIPTION FACTOR TMO6 Description:  1-aminocyclopropane-1-carboxylate deaminase, putative
Genomic Order:  5780 Name:  ? Medtr8g107670
Secondary Identifier:  ? PAC:31073983
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g107670 0.5kb upstream 0.5kb upstream 7573   true chr8: 45519813-45527385 Medicago truncatula
Medtr8g107670 0.5kb upstream 0.5kb upstream 500   false chr8: 45526886-45527385 Medicago truncatula
Medtr8g107670 0.5kb downstream 0.5kb downstream 7573   true chr8: 45519313-45526885 Medicago truncatula
Medtr8g107670 0.5kb downstream 0.5kb downstream 500   false chr8: 45519313-45519812 Medicago truncatula
Medtr8g107670 1.0kb upstream 1.0kb upstream 8073   true chr8: 45519813-45527885 Medicago truncatula
Medtr8g107670 1.0kb upstream 1.0kb upstream 1000   false chr8: 45526886-45527885 Medicago truncatula
Medtr8g107670 1.0kb downstream 1.0kb downstream 8073   true chr8: 45518813-45526885 Medicago truncatula
Medtr8g107670 1.0kb downstream 1.0kb downstream 1000   false chr8: 45518813-45519812 Medicago truncatula
Medtr8g107670 2.0kb upstream 2.0kb upstream 9073   true chr8: 45519813-45528885 Medicago truncatula
Medtr8g107670 2.0kb upstream 2.0kb upstream 2000   false chr8: 45526886-45528885 Medicago truncatula
Medtr8g107670 2.0kb downstream 2.0kb downstream 9073   true chr8: 45517813-45526885 Medicago truncatula
Medtr8g107670 2.0kb downstream 2.0kb downstream 2000   false chr8: 45517813-45519812 Medicago truncatula
Medtr8g107670 5.0kb upstream 5.0kb upstream 12073   true chr8: 45519813-45531885 Medicago truncatula
Medtr8g107670 5.0kb upstream 5.0kb upstream 5000   false chr8: 45526886-45531885 Medicago truncatula
Medtr8g107670 5.0kb downstream 5.0kb downstream 12073   true chr8: 45514813-45526885 Medicago truncatula
Medtr8g107670 5.0kb downstream 5.0kb downstream 5000   false chr8: 45514813-45519812 Medicago truncatula
Medtr8g107670 10.0kb upstream 10.0kb upstream 17073   true chr8: 45519813-45536885 Medicago truncatula
Medtr8g107670 10.0kb upstream 10.0kb upstream 10000   false chr8: 45526886-45536885 Medicago truncatula
Medtr8g107670 10.0kb downstream 10.0kb downstream 17073   true chr8: 45509813-45526885 Medicago truncatula
Medtr8g107670 10.0kb downstream 10.0kb downstream 10000   false chr8: 45509813-45519812 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305012 5265 Fabidae View MSA
124063138 5270 Rosid View MSA
123740733 5271 Pentapetalae View MSA
122789564 5272 Eudicot View MSA
122051131 5273 Angiosperm View MSA
121346707 5274 Embryophyte View MSA
123428019 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.703        
cufflinks 2.038        
cufflinks 1.986        
cufflinks 0.746        
cufflinks 1.648        
cufflinks 0.245       Low
cufflinks 1.014        
cufflinks 1.853        
cufflinks 1.853        

0 Strain