Gene : Medtr1309s0010 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF03412 - Peptidase C39 family (Peptidase_C39) Description:  colicin V secretion-processing ATP-binding protein
Genomic Order:  1 Name:  ? Medtr1309s0010
Secondary Identifier:  ? PAC:31092104
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1309s0010 0.5kb upstream 0.5kb upstream 2070 true scaffold1309: 20-2089 Medicago truncatula
Medtr1309s0010 0.5kb upstream 0.5kb upstream 111 false scaffold1309: 1979-2089 Medicago truncatula
Medtr1309s0010 0.5kb downstream 0.5kb downstream 1978 true scaffold1309: 1-1978 Medicago truncatula
Medtr1309s0010 0.5kb downstream 0.5kb downstream 19 false scaffold1309: 1-19 Medicago truncatula
Medtr1309s0010 1.0kb upstream 1.0kb upstream 2070 true scaffold1309: 20-2089 Medicago truncatula
Medtr1309s0010 1.0kb upstream 1.0kb upstream 111 false scaffold1309: 1979-2089 Medicago truncatula
Medtr1309s0010 1.0kb downstream 1.0kb downstream 1978 true scaffold1309: 1-1978 Medicago truncatula
Medtr1309s0010 1.0kb downstream 1.0kb downstream 19 false scaffold1309: 1-19 Medicago truncatula
Medtr1309s0010 2.0kb upstream 2.0kb upstream 2070 true scaffold1309: 20-2089 Medicago truncatula
Medtr1309s0010 2.0kb upstream 2.0kb upstream 111 false scaffold1309: 1979-2089 Medicago truncatula
Medtr1309s0010 2.0kb downstream 2.0kb downstream 1978 true scaffold1309: 1-1978 Medicago truncatula
Medtr1309s0010 2.0kb downstream 2.0kb downstream 19 false scaffold1309: 1-19 Medicago truncatula
Medtr1309s0010 5.0kb upstream 5.0kb upstream 2070 true scaffold1309: 20-2089 Medicago truncatula
Medtr1309s0010 5.0kb upstream 5.0kb upstream 111 false scaffold1309: 1979-2089 Medicago truncatula
Medtr1309s0010 5.0kb downstream 5.0kb downstream 1978 true scaffold1309: 1-1978 Medicago truncatula
Medtr1309s0010 5.0kb downstream 5.0kb downstream 19 false scaffold1309: 1-19 Medicago truncatula
Medtr1309s0010 10.0kb upstream 10.0kb upstream 2070 true scaffold1309: 20-2089 Medicago truncatula
Medtr1309s0010 10.0kb upstream 10.0kb upstream 111 false scaffold1309: 1979-2089 Medicago truncatula
Medtr1309s0010 10.0kb downstream 10.0kb downstream 1978 true scaffold1309: 1-1978 Medicago truncatula
Medtr1309s0010 10.0kb downstream 10.0kb downstream 19 false scaffold1309: 1-19 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121632352 5273 Angiosperm Singleton cluster - no MSA
122271047 5265 Fabidae Singleton cluster - no MSA
124011709 5270 Rosid Singleton cluster - no MSA
123585608 5271 Pentapetalae Singleton cluster - no MSA
122620305 5272 Eudicot Singleton cluster - no MSA
120904456 5274 Embryophyte Singleton cluster - no MSA
122945106 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain