Gene : Medtr1675s0010 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF11300 - Protein of unknown function (DUF3102) (DUF3102) Description:  prophage protein, putative
Genomic Order:  1 Name:  ? Medtr1675s0010
Secondary Identifier:  ? PAC:31084825
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1675s0010 0.5kb upstream 0.5kb upstream 1457 true scaffold1675: 1-1457 Medicago truncatula
Medtr1675s0010 0.5kb upstream 0.5kb upstream 221 false scaffold1675: 1-221 Medicago truncatula
Medtr1675s0010 0.5kb downstream 0.5kb downstream 1267 true scaffold1675: 222-1488 Medicago truncatula
Medtr1675s0010 0.5kb downstream 0.5kb downstream 31 false scaffold1675: 1458-1488 Medicago truncatula
Medtr1675s0010 1.0kb upstream 1.0kb upstream 1457 true scaffold1675: 1-1457 Medicago truncatula
Medtr1675s0010 1.0kb upstream 1.0kb upstream 221 false scaffold1675: 1-221 Medicago truncatula
Medtr1675s0010 1.0kb downstream 1.0kb downstream 1267 true scaffold1675: 222-1488 Medicago truncatula
Medtr1675s0010 1.0kb downstream 1.0kb downstream 31 false scaffold1675: 1458-1488 Medicago truncatula
Medtr1675s0010 2.0kb upstream 2.0kb upstream 1457 true scaffold1675: 1-1457 Medicago truncatula
Medtr1675s0010 2.0kb upstream 2.0kb upstream 221 false scaffold1675: 1-221 Medicago truncatula
Medtr1675s0010 2.0kb downstream 2.0kb downstream 1267 true scaffold1675: 222-1488 Medicago truncatula
Medtr1675s0010 2.0kb downstream 2.0kb downstream 31 false scaffold1675: 1458-1488 Medicago truncatula
Medtr1675s0010 5.0kb upstream 5.0kb upstream 1457 true scaffold1675: 1-1457 Medicago truncatula
Medtr1675s0010 5.0kb upstream 5.0kb upstream 221 false scaffold1675: 1-221 Medicago truncatula
Medtr1675s0010 5.0kb downstream 5.0kb downstream 1267 true scaffold1675: 222-1488 Medicago truncatula
Medtr1675s0010 5.0kb downstream 5.0kb downstream 31 false scaffold1675: 1458-1488 Medicago truncatula
Medtr1675s0010 10.0kb upstream 10.0kb upstream 1457 true scaffold1675: 1-1457 Medicago truncatula
Medtr1675s0010 10.0kb upstream 10.0kb upstream 221 false scaffold1675: 1-221 Medicago truncatula
Medtr1675s0010 10.0kb downstream 10.0kb downstream 1267 true scaffold1675: 222-1488 Medicago truncatula
Medtr1675s0010 10.0kb downstream 10.0kb downstream 31 false scaffold1675: 1458-1488 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121632417 5273 Angiosperm Singleton cluster - no MSA
122271119 5265 Fabidae Singleton cluster - no MSA
124011775 5270 Rosid Singleton cluster - no MSA
123585673 5271 Pentapetalae Singleton cluster - no MSA
122620370 5272 Eudicot Singleton cluster - no MSA
120904521 5274 Embryophyte Singleton cluster - no MSA
122945171 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain