Gene : Medtr1693s0010 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR30332 - PROBABLE GENERAL SECRETION PATHWAY PROTEIN D Description:  type II and III secretion system protein
Genomic Order:  1 Name:  ? Medtr1693s0010
Secondary Identifier:  ? PAC:31106217
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1693s0010 0.5kb upstream 0.5kb upstream 1366 true scaffold1693: 99-1464 Medicago truncatula
Medtr1693s0010 0.5kb upstream 0.5kb upstream 201 false scaffold1693: 1264-1464 Medicago truncatula
Medtr1693s0010 0.5kb downstream 0.5kb downstream 1263 true scaffold1693: 1-1263 Medicago truncatula
Medtr1693s0010 0.5kb downstream 0.5kb downstream 98 false scaffold1693: 1-98 Medicago truncatula
Medtr1693s0010 1.0kb upstream 1.0kb upstream 1366 true scaffold1693: 99-1464 Medicago truncatula
Medtr1693s0010 1.0kb upstream 1.0kb upstream 201 false scaffold1693: 1264-1464 Medicago truncatula
Medtr1693s0010 1.0kb downstream 1.0kb downstream 1263 true scaffold1693: 1-1263 Medicago truncatula
Medtr1693s0010 1.0kb downstream 1.0kb downstream 98 false scaffold1693: 1-98 Medicago truncatula
Medtr1693s0010 2.0kb upstream 2.0kb upstream 1366 true scaffold1693: 99-1464 Medicago truncatula
Medtr1693s0010 2.0kb upstream 2.0kb upstream 201 false scaffold1693: 1264-1464 Medicago truncatula
Medtr1693s0010 2.0kb downstream 2.0kb downstream 1263 true scaffold1693: 1-1263 Medicago truncatula
Medtr1693s0010 2.0kb downstream 2.0kb downstream 98 false scaffold1693: 1-98 Medicago truncatula
Medtr1693s0010 5.0kb upstream 5.0kb upstream 1366 true scaffold1693: 99-1464 Medicago truncatula
Medtr1693s0010 5.0kb upstream 5.0kb upstream 201 false scaffold1693: 1264-1464 Medicago truncatula
Medtr1693s0010 5.0kb downstream 5.0kb downstream 1263 true scaffold1693: 1-1263 Medicago truncatula
Medtr1693s0010 5.0kb downstream 5.0kb downstream 98 false scaffold1693: 1-98 Medicago truncatula
Medtr1693s0010 10.0kb upstream 10.0kb upstream 1366 true scaffold1693: 99-1464 Medicago truncatula
Medtr1693s0010 10.0kb upstream 10.0kb upstream 201 false scaffold1693: 1264-1464 Medicago truncatula
Medtr1693s0010 10.0kb downstream 10.0kb downstream 1263 true scaffold1693: 1-1263 Medicago truncatula
Medtr1693s0010 10.0kb downstream 10.0kb downstream 98 false scaffold1693: 1-98 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657485 5273 Angiosperm View MSA
122271124 5265 Fabidae Singleton cluster - no MSA
124039383 5270 Rosid View MSA
123611288 5271 Pentapetalae View MSA
122645859 5272 Eudicot View MSA
120929526 5274 Embryophyte View MSA
122970084 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain