Gene : Medtr1874s0010 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR26402:SF292 - TRANSCRIPTIONAL REGULATORY PROTEIN OMPR Description:  transcriptional regulatory protein
Genomic Order:  1 Name:  ? Medtr1874s0010
Secondary Identifier:  ? PAC:31106219
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1874s0010 0.5kb upstream 0.5kb upstream 1220 true scaffold1874: 20-1239 Medicago truncatula
Medtr1874s0010 0.5kb upstream 0.5kb upstream 500 false scaffold1874: 20-519 Medicago truncatula
Medtr1874s0010 0.5kb downstream 0.5kb downstream 760 true scaffold1874: 520-1279 Medicago truncatula
Medtr1874s0010 0.5kb downstream 0.5kb downstream 40 false scaffold1874: 1240-1279 Medicago truncatula
Medtr1874s0010 1.0kb upstream 1.0kb upstream 1239 true scaffold1874: 1-1239 Medicago truncatula
Medtr1874s0010 1.0kb upstream 1.0kb upstream 519 false scaffold1874: 1-519 Medicago truncatula
Medtr1874s0010 1.0kb downstream 1.0kb downstream 760 true scaffold1874: 520-1279 Medicago truncatula
Medtr1874s0010 1.0kb downstream 1.0kb downstream 40 false scaffold1874: 1240-1279 Medicago truncatula
Medtr1874s0010 2.0kb upstream 2.0kb upstream 1239 true scaffold1874: 1-1239 Medicago truncatula
Medtr1874s0010 2.0kb upstream 2.0kb upstream 519 false scaffold1874: 1-519 Medicago truncatula
Medtr1874s0010 2.0kb downstream 2.0kb downstream 760 true scaffold1874: 520-1279 Medicago truncatula
Medtr1874s0010 2.0kb downstream 2.0kb downstream 40 false scaffold1874: 1240-1279 Medicago truncatula
Medtr1874s0010 5.0kb upstream 5.0kb upstream 1239 true scaffold1874: 1-1239 Medicago truncatula
Medtr1874s0010 5.0kb upstream 5.0kb upstream 519 false scaffold1874: 1-519 Medicago truncatula
Medtr1874s0010 5.0kb downstream 5.0kb downstream 760 true scaffold1874: 520-1279 Medicago truncatula
Medtr1874s0010 5.0kb downstream 5.0kb downstream 40 false scaffold1874: 1240-1279 Medicago truncatula
Medtr1874s0010 10.0kb upstream 10.0kb upstream 1239 true scaffold1874: 1-1239 Medicago truncatula
Medtr1874s0010 10.0kb upstream 10.0kb upstream 519 false scaffold1874: 1-519 Medicago truncatula
Medtr1874s0010 10.0kb downstream 10.0kb downstream 760 true scaffold1874: 520-1279 Medicago truncatula
Medtr1874s0010 10.0kb downstream 10.0kb downstream 40 false scaffold1874: 1240-1279 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782574 5273 Angiosperm View MSA
122271158 5265 Fabidae Singleton cluster - no MSA
124039399 5270 Rosid View MSA
123753250 5271 Pentapetalae View MSA
122775012 5272 Eudicot View MSA
121054085 5274 Embryophyte View MSA
123094083 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain