Gene : Medtr1781s0010 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR30118 - HTH-TYPE TRANSCRIPTIONAL REGULATOR LEUO-RELATED Description:  LysR family transcriptional regulator
Genomic Order:  1 Name:  ? Medtr1781s0010
Secondary Identifier:  ? PAC:31092046
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1781s0010 0.5kb upstream 0.5kb upstream 815 true scaffold1781: 142-956 Medicago truncatula
Medtr1781s0010 0.5kb upstream 0.5kb upstream 500 false scaffold1781: 457-956 Medicago truncatula
Medtr1781s0010 0.5kb downstream 0.5kb downstream 456 true scaffold1781: 1-456 Medicago truncatula
Medtr1781s0010 0.5kb downstream 0.5kb downstream 141 false scaffold1781: 1-141 Medicago truncatula
Medtr1781s0010 1.0kb upstream 1.0kb upstream 1225 true scaffold1781: 142-1366 Medicago truncatula
Medtr1781s0010 1.0kb upstream 1.0kb upstream 910 false scaffold1781: 457-1366 Medicago truncatula
Medtr1781s0010 1.0kb downstream 1.0kb downstream 456 true scaffold1781: 1-456 Medicago truncatula
Medtr1781s0010 1.0kb downstream 1.0kb downstream 141 false scaffold1781: 1-141 Medicago truncatula
Medtr1781s0010 2.0kb upstream 2.0kb upstream 1225 true scaffold1781: 142-1366 Medicago truncatula
Medtr1781s0010 2.0kb upstream 2.0kb upstream 910 false scaffold1781: 457-1366 Medicago truncatula
Medtr1781s0010 2.0kb downstream 2.0kb downstream 456 true scaffold1781: 1-456 Medicago truncatula
Medtr1781s0010 2.0kb downstream 2.0kb downstream 141 false scaffold1781: 1-141 Medicago truncatula
Medtr1781s0010 5.0kb upstream 5.0kb upstream 1225 true scaffold1781: 142-1366 Medicago truncatula
Medtr1781s0010 5.0kb upstream 5.0kb upstream 910 false scaffold1781: 457-1366 Medicago truncatula
Medtr1781s0010 5.0kb downstream 5.0kb downstream 456 true scaffold1781: 1-456 Medicago truncatula
Medtr1781s0010 5.0kb downstream 5.0kb downstream 141 false scaffold1781: 1-141 Medicago truncatula
Medtr1781s0010 10.0kb upstream 10.0kb upstream 1225 true scaffold1781: 142-1366 Medicago truncatula
Medtr1781s0010 10.0kb upstream 10.0kb upstream 910 false scaffold1781: 457-1366 Medicago truncatula
Medtr1781s0010 10.0kb downstream 10.0kb downstream 456 true scaffold1781: 1-456 Medicago truncatula
Medtr1781s0010 10.0kb downstream 10.0kb downstream 141 false scaffold1781: 1-141 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121632439 5273 Angiosperm Singleton cluster - no MSA
122271143 5265 Fabidae Singleton cluster - no MSA
124011797 5270 Rosid Singleton cluster - no MSA
123585695 5271 Pentapetalae Singleton cluster - no MSA
122620392 5272 Eudicot Singleton cluster - no MSA
120904543 5274 Embryophyte Singleton cluster - no MSA
122945193 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain