Gene : Medtr0374s0040 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  2
Name:  ? Medtr0374s0040 Secondary Identifier:  ? PAC:31106254
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0374s0040 0.5kb upstream 0.5kb upstream 722 true scaffold0374: 11440-12161 Medicago truncatula
Medtr0374s0040 0.5kb upstream 0.5kb upstream 500 false scaffold0374: 11662-12161 Medicago truncatula
Medtr0374s0040 0.5kb downstream 0.5kb downstream 722 true scaffold0374: 10940-11661 Medicago truncatula
Medtr0374s0040 0.5kb downstream 0.5kb downstream 500 false scaffold0374: 10940-11439 Medicago truncatula
Medtr0374s0040 1.0kb upstream 1.0kb upstream 1222 true scaffold0374: 11440-12661 Medicago truncatula
Medtr0374s0040 1.0kb upstream 1.0kb upstream 1000 false scaffold0374: 11662-12661 Medicago truncatula
Medtr0374s0040 1.0kb downstream 1.0kb downstream 1222 true scaffold0374: 10440-11661 Medicago truncatula
Medtr0374s0040 1.0kb downstream 1.0kb downstream 1000 false scaffold0374: 10440-11439 Medicago truncatula
Medtr0374s0040 2.0kb upstream 2.0kb upstream 2222 true scaffold0374: 11440-13661 Medicago truncatula
Medtr0374s0040 2.0kb upstream 2.0kb upstream 2000 false scaffold0374: 11662-13661 Medicago truncatula
Medtr0374s0040 2.0kb downstream 2.0kb downstream 2222 true scaffold0374: 9440-11661 Medicago truncatula
Medtr0374s0040 2.0kb downstream 2.0kb downstream 2000 false scaffold0374: 9440-11439 Medicago truncatula
Medtr0374s0040 5.0kb upstream 5.0kb upstream 5222 true scaffold0374: 11440-16661 Medicago truncatula
Medtr0374s0040 5.0kb upstream 5.0kb upstream 5000 false scaffold0374: 11662-16661 Medicago truncatula
Medtr0374s0040 5.0kb downstream 5.0kb downstream 5222 true scaffold0374: 6440-11661 Medicago truncatula
Medtr0374s0040 5.0kb downstream 5.0kb downstream 5000 false scaffold0374: 6440-11439 Medicago truncatula
Medtr0374s0040 10.0kb upstream 10.0kb upstream 5758 true scaffold0374: 11440-17197 Medicago truncatula
Medtr0374s0040 10.0kb upstream 10.0kb upstream 5536 false scaffold0374: 11662-17197 Medicago truncatula
Medtr0374s0040 10.0kb downstream 10.0kb downstream 10222 true scaffold0374: 1440-11661 Medicago truncatula
Medtr0374s0040 10.0kb downstream 10.0kb downstream 10000 false scaffold0374: 1440-11439 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121632029 5273 Angiosperm Singleton cluster - no MSA
122270696 5265 Fabidae Singleton cluster - no MSA
124011384 5270 Rosid Singleton cluster - no MSA
123585284 5271 Pentapetalae Singleton cluster - no MSA
122619982 5272 Eudicot Singleton cluster - no MSA
120904133 5274 Embryophyte Singleton cluster - no MSA
122944788 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain