Gene : Medtr0415s0060 M. truncatula Mt4.0v1
Defline:  (1 of 25) PF04525 - LURP-one-related (LOR) Description:  tubby C 2 protein
Genomic Order:  4 Name:  ? Medtr0415s0060
Secondary Identifier:  ? PAC:31100932
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0415s0060 0.5kb upstream 0.5kb upstream 1455 true scaffold0415: 14076-15530 Medicago truncatula
Medtr0415s0060 0.5kb upstream 0.5kb upstream 500 false scaffold0415: 14076-14575 Medicago truncatula
Medtr0415s0060 0.5kb downstream 0.5kb downstream 1201 true scaffold0415: 14576-15776 Medicago truncatula
Medtr0415s0060 0.5kb downstream 0.5kb downstream 246 false scaffold0415: 15531-15776 Medicago truncatula
Medtr0415s0060 1.0kb upstream 1.0kb upstream 1955 true scaffold0415: 13576-15530 Medicago truncatula
Medtr0415s0060 1.0kb upstream 1.0kb upstream 1000 false scaffold0415: 13576-14575 Medicago truncatula
Medtr0415s0060 1.0kb downstream 1.0kb downstream 1201 true scaffold0415: 14576-15776 Medicago truncatula
Medtr0415s0060 1.0kb downstream 1.0kb downstream 246 false scaffold0415: 15531-15776 Medicago truncatula
Medtr0415s0060 2.0kb upstream 2.0kb upstream 2955 true scaffold0415: 12576-15530 Medicago truncatula
Medtr0415s0060 2.0kb upstream 2.0kb upstream 2000 false scaffold0415: 12576-14575 Medicago truncatula
Medtr0415s0060 2.0kb downstream 2.0kb downstream 1201 true scaffold0415: 14576-15776 Medicago truncatula
Medtr0415s0060 2.0kb downstream 2.0kb downstream 246 false scaffold0415: 15531-15776 Medicago truncatula
Medtr0415s0060 5.0kb upstream 5.0kb upstream 5955 true scaffold0415: 9576-15530 Medicago truncatula
Medtr0415s0060 5.0kb upstream 5.0kb upstream 5000 false scaffold0415: 9576-14575 Medicago truncatula
Medtr0415s0060 5.0kb downstream 5.0kb downstream 1201 true scaffold0415: 14576-15776 Medicago truncatula
Medtr0415s0060 5.0kb downstream 5.0kb downstream 246 false scaffold0415: 15531-15776 Medicago truncatula
Medtr0415s0060 10.0kb upstream 10.0kb upstream 10955 true scaffold0415: 4576-15530 Medicago truncatula
Medtr0415s0060 10.0kb upstream 10.0kb upstream 10000 false scaffold0415: 4576-14575 Medicago truncatula
Medtr0415s0060 10.0kb downstream 10.0kb downstream 1201 true scaffold0415: 14576-15776 Medicago truncatula
Medtr0415s0060 10.0kb downstream 10.0kb downstream 246 false scaffold0415: 15531-15776 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305151 5265 Fabidae View MSA
124063316 5270 Rosid View MSA
123746736 5271 Pentapetalae View MSA
122786164 5272 Eudicot View MSA
122048996 5273 Angiosperm View MSA
121311201 5274 Embryophyte View MSA
123348527 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.038     Low  
cufflinks 0.012     Low Low
cufflinks 0.016     Low  
cufflinks 0.024     Low  
cufflinks 0.035     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.07     Low High
cufflinks 0.012     Low Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain