Gene : Medtr0398s0030 M. truncatula Mt4.0v1
Description:  methyltransferase-like protein Genomic Order:  1
Name:  ? Medtr0398s0030 Secondary Identifier:  ? PAC:31092100
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0398s0030 0.5kb upstream 0.5kb upstream 836 true scaffold0398: 14586-15421 Medicago truncatula
Medtr0398s0030 0.5kb upstream 0.5kb upstream 500 false scaffold0398: 14586-15085 Medicago truncatula
Medtr0398s0030 0.5kb downstream 0.5kb downstream 836 true scaffold0398: 15086-15921 Medicago truncatula
Medtr0398s0030 0.5kb downstream 0.5kb downstream 500 false scaffold0398: 15422-15921 Medicago truncatula
Medtr0398s0030 1.0kb upstream 1.0kb upstream 1336 true scaffold0398: 14086-15421 Medicago truncatula
Medtr0398s0030 1.0kb upstream 1.0kb upstream 1000 false scaffold0398: 14086-15085 Medicago truncatula
Medtr0398s0030 1.0kb downstream 1.0kb downstream 1329 true scaffold0398: 15086-16414 Medicago truncatula
Medtr0398s0030 1.0kb downstream 1.0kb downstream 993 false scaffold0398: 15422-16414 Medicago truncatula
Medtr0398s0030 2.0kb upstream 2.0kb upstream 2336 true scaffold0398: 13086-15421 Medicago truncatula
Medtr0398s0030 2.0kb upstream 2.0kb upstream 2000 false scaffold0398: 13086-15085 Medicago truncatula
Medtr0398s0030 2.0kb downstream 2.0kb downstream 1329 true scaffold0398: 15086-16414 Medicago truncatula
Medtr0398s0030 2.0kb downstream 2.0kb downstream 993 false scaffold0398: 15422-16414 Medicago truncatula
Medtr0398s0030 5.0kb upstream 5.0kb upstream 5336 true scaffold0398: 10086-15421 Medicago truncatula
Medtr0398s0030 5.0kb upstream 5.0kb upstream 5000 false scaffold0398: 10086-15085 Medicago truncatula
Medtr0398s0030 5.0kb downstream 5.0kb downstream 1329 true scaffold0398: 15086-16414 Medicago truncatula
Medtr0398s0030 5.0kb downstream 5.0kb downstream 993 false scaffold0398: 15422-16414 Medicago truncatula
Medtr0398s0030 10.0kb upstream 10.0kb upstream 10336 true scaffold0398: 5086-15421 Medicago truncatula
Medtr0398s0030 10.0kb upstream 10.0kb upstream 10000 false scaffold0398: 5086-15085 Medicago truncatula
Medtr0398s0030 10.0kb downstream 10.0kb downstream 1329 true scaffold0398: 15086-16414 Medicago truncatula
Medtr0398s0030 10.0kb downstream 10.0kb downstream 993 false scaffold0398: 15422-16414 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122270713 5265 Fabidae Singleton cluster - no MSA
124067801 5270 Rosid View MSA
123745806 5271 Pentapetalae View MSA
122791718 5272 Eudicot View MSA
122044288 5273 Angiosperm View MSA
121345647 5274 Embryophyte View MSA
123380250 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.043     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain